RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 TMEM9Q9P0T7 183 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 SLC2A6Q9UGQ3 507 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 TLR5O60602 858 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 IPO13O94829 963 aaKnown RBP13.59□□□□□ -0.23
GGA3-214ENST00000582717 HNRNPLP14866 589 aaKnown RBP eCLIP13.59□□□□□ -0.232e-7■■■■□ 23.5
GGA3-214ENST00000582717 IDO1P14902 403 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 PORP16435 677 aaPredicted RBP13.59□□□□□ -0.23
GGA3-214ENST00000582717 IL10P22301 178 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 ARNTP27540 789 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 GRIA3P42263 894 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 WNT3AP56704 352 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 TAS2R39P59534 338 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 ATP6V0D1P61421 351 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 MERTKQ12866 999 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 IHHQ14623 411 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 ARHGEF6Q15052 776 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 TECRLQ5HYJ1 363 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.59□□□□□ -0.23
GGA3-214ENST00000582717 LYSMD3Q7Z3D4 306 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 DEFB128Q7Z7B8 93 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 CUZD1Q86UP6 607 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 PPHLN1Q8NEY8 458 aaKnown RBP13.59□□□□□ -0.23
GGA3-214ENST00000582717 FBXO22Q8NEZ5 403 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 PSMG2Q969U7 264 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 ELMO2Q96JJ3 720 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 CNDP2Q96KP4 475 aaKnown RBP13.59□□□□□ -0.23
GGA3-214ENST00000582717 HOPXQ9BPY8 73 aaPredicted RBP13.59□□□□□ -0.23
GGA3-214ENST00000582717 NPLQ9BXD5 320 aaPredicted RBP13.59□□□□□ -0.23
GGA3-214ENST00000582717 YTHDF1Q9BYJ9 559 aaKnown RBP13.59□□□□□ -0.23
GGA3-214ENST00000582717 SLC25A51Q9H1U9 297 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 SP110Q9HB58 689 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 PALMDQ9NP74 551 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 BLOC1S6Q9UL45 172 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 TCAF1Q9Y4C2 921 aa13.59□□□□□ -0.23
GGA3-214ENST00000582717 DHRS12A0PJE2 317 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 DRGXA6NNA5 263 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 GIPC1O14908 333 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 CXCL10P02778 98 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 FCGR1AP12314 374 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 PAMP19021 973 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 ATP6V1B2P21281 511 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 ARCN1P48444 511 aaKnown RBP13.58□□□□□ -0.24
GGA3-214ENST00000582717 KCNQ1P51787 676 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 PGGT1BP53609 377 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 C1QTNF8P60827 252 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 SMARCB1Q12824 385 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 ZNF460Q14592 562 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 SLC36A3Q495N2 470 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 TBCELQ5QJ74 424 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 AGAP9Q5VTM2 703 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 SLC22A9Q8IVM8 553 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 MFSD6LQ8IWD5 586 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 C2orf15Q8WU43 125 aaKnown RBP13.58□□□□□ -0.24
GGA3-214ENST00000582717 PABPC5Q96DU9 382 aaKnown RBP13.58□□□□□ -0.24
GGA3-214ENST00000582717 IMP4Q96G21 291 aaKnown RBP13.58□□□□□ -0.24
GGA3-214ENST00000582717 FEM1CQ96JP0 617 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 RPRD1AQ96P16 312 aaPredicted RBP13.58□□□□□ -0.24
GGA3-214ENST00000582717 PPP1R2P1Q96PQ5 205 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 AGPAT4Q9NRZ5 378 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 COMMD8Q9NX08 183 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 ABCD2Q9UBJ2 740 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 PCDHGA4Q9Y5G9 962 aa13.58□□□□□ -0.24
GGA3-214ENST00000582717 TTC24A2A3L6 582 aaPredicted RBP13.57□□□□□ -0.24
GGA3-214ENST00000582717 TRIM64BA6NI03 449 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 SAC3D1A6NKF1 404 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 A8MT66 165 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 DLGAP1O14490 977 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 EFEMP2O95967 443 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 MMP2P08253 660 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 RBP1P09455 135 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 HSD17B1P14061 328 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 FASP25445 335 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 PSMA4P25789 261 aaKnown RBP13.57□□□□□ -0.24
GGA3-214ENST00000582717 DSC2Q02487 901 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 RING1Q06587 406 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 PDCD4Q53EL6 469 aaKnown RBP13.57□□□□□ -0.24
GGA3-214ENST00000582717 KIAA0408Q6ZU52 694 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 DENND6AQ8IWF6 608 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 C2CD4AQ8NCU7 369 aaPredicted RBP13.57□□□□□ -0.24
GGA3-214ENST00000582717 FATE1Q969F0 183 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.57□□□□□ -0.245e-7■■■■□ 23.5
GGA3-214ENST00000582717 CENPNQ96H22 339 aaPredicted RBP13.57□□□□□ -0.24
GGA3-214ENST00000582717 GPATCH1Q9BRR8 931 aaKnown RBP13.57□□□□□ -0.24
GGA3-214ENST00000582717 TTLL2Q9BWV7 592 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 RPF2Q9H7B2 306 aaKnown RBP13.57□□□□□ -0.24
GGA3-214ENST00000582717 IGSF5Q9NSI5 407 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 CDC14AQ9UNH5 594 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 NDUFAF1Q9Y375 327 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 FIS1Q9Y3D6 152 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 COL4A6Q14031 1691 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 TMEM221A6NGB7 291 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 H3BMQ9 156 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 HDCP19113 662 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 VARSP26640 1264 aaKnown RBP13.57□□□□□ -0.24
GGA3-214ENST00000582717 ACVRL1P37023 503 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 CD86P42081 329 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 RENBPP51606 427 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 NAA20P61599 178 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 CTBSQ01459 385 aa13.57□□□□□ -0.24
GGA3-214ENST00000582717 ITKQ08881 620 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms