RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 GPR34Q9UPC5 381 aa10.99□□□□□ -0.65
SHCBP1-207ENST00000569702 DOLKQ9UPQ8 538 aa10.99□□□□□ -0.65
SHCBP1-207ENST00000569702 ZKSCAN5Q9Y2L8 839 aa10.99□□□□□ -0.65
SHCBP1-207ENST00000569702 JRKLQ9Y4A0 524 aa10.99□□□□□ -0.65
SHCBP1-207ENST00000569702 SCN8AQ9UQD0 1980 aa10.99□□□□□ -0.65
SHCBP1-207ENST00000569702 ARHGEF17Q96PE2 2063 aaPredicted RBP10.99□□□□□ -0.65
SHCBP1-207ENST00000569702 ZSCAN12O43309 604 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 OPA1O60313 960 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 DNAJC6O75061 913 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 PPFIA2O75334 1257 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 FGGP02679 453 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 ATP1A1P05023 1023 aaKnown RBP10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 ADCY8P40145 1251 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 CLDN6P56747 220 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 CTBSQ01459 385 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 ILF3Q12906 894 aaKnown RBP eCLIP10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 CAMK2BQ13554 666 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 ZNF569Q5MCW4 686 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 CDCP2Q5VXM1 449 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 ZDHHC20Q5W0Z9 365 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 ALS2CLQ60I27 953 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 EFL1Q7Z2Z2 1120 aaKnown RBP10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 GLT6D1Q7Z4J2 308 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 C17orf82Q86X59 251 aaPredicted RBP10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 KYQ8NBH2 561 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 FAM46DQ8NEK8 389 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 IFI44Q8TCB0 444 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 BRSK1Q8TDC3 778 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 NAT6Q93015 286 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 GLYATL1Q969I3 302 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 VPS35Q96QK1 796 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 OR2M4Q96R27 311 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 TBL1YQ9BQ87 522 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 APOL2Q9BQE5 337 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 SPATA16Q9BXB7 569 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 GSDMCQ9BYG8 508 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 RMI1Q9H9A7 625 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 BPIFA1Q9NP55 256 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 SPATS2LQ9NUQ6 558 aaKnown RBP10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 FEZ2Q9UHY8 353 aaPredicted RBP10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 TMPRSS11EQ9UL52 423 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 PADI4Q9UM07 663 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 ZNF148Q9UQR1 794 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 DRG1Q9Y295 367 aaKnown RBP10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 PCYT1BQ9Y5K3 369 aaPredicted RBP10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 RP1P56715 2156 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 EPG5Q9HCE0 2579 aa10.98□□□□□ -0.65
SHCBP1-207ENST00000569702 IGF2RP11717 2491 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 MAP1BP46821 2468 aaKnown RBP10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 CPED1A4D0V7 1026 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 FAM149AA5PLN7 773 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 C1QTNF9BB2RNN3 333 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 GAPDHSO14556 408 aaPredicted RBP10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 NUAK1O60285 661 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 NOBOXO60393 691 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 USP12O75317 370 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 SLC25A14O95258 325 aaPredicted RBP10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 ASMTLO95671 621 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 AP2A1O95782 977 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 CAPNS1P04632 268 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 C1QTNF9P0C862 333 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 LPOP22079 712 aaPredicted RBP10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 AK4P27144 223 aaPredicted RBP10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 CXCR5P32302 372 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 LRP8Q14114 963 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 SPARCL1Q14515 664 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 TAF1AQ15573 450 aaPredicted RBP10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 ATP13A5Q4VNC0 1218 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 PERM1Q5SV97 790 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 HES3Q5TGS1 186 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 UNQ6494/PRO21346Q6UXR6 183 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 MARK2Q7KZI7 788 aaKnown RBP10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 MARCH9Q86YJ5 346 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 GALNT13Q8IUC8 556 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 SFTPA2Q8IWL1 248 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 PDCD7Q8N8D1 485 aaKnown RBP10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 DCBLD1Q8N8Z6 715 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 OR6C4Q8NGE1 309 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 MAIP1Q8WWC4 291 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 C19orf43Q9BQ61 176 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 DPEP2Q9H4A9 486 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 SUDS3Q9H7L9 328 aaPredicted RBP10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 LRRC40Q9H9A6 602 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 TRIM39Q9HCM9 518 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 TAAR2Q9P1P5 351 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 SIRPGQ9P1W8 387 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 ATXN10Q9UBB4 475 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 GULP1Q9UBP9 304 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 PKP3Q9Y446 797 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 PLEKHM1Q9Y4G2 1056 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 GPSM3Q9Y4H4 160 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 ARL5AQ9Y689 179 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 ZZEF1O43149 2961 aa10.97□□□□□ -0.65
SHCBP1-207ENST00000569702 C2orf81A6NN90 581 aa10.96□□□□□ -0.65
SHCBP1-207ENST00000569702 GPR89AB7ZAQ6 455 aa10.96□□□□□ -0.65
SHCBP1-207ENST00000569702 CHUKO15111 745 aa10.96□□□□□ -0.65
SHCBP1-207ENST00000569702 STX7O15400 261 aaKnown RBP10.96□□□□□ -0.65
SHCBP1-207ENST00000569702 PSMD3O43242 534 aa10.96□□□□□ -0.65
SHCBP1-207ENST00000569702 BUD23O43709 281 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms