RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 ZDHHC20Q5W0Z9 365 aa18.56■□□□□ 0.56
CMTM3-210ENST00000565666 PDPK2PQ6A1A2 396 aa18.56■□□□□ 0.56
CMTM3-210ENST00000565666 RANBP10Q6VN20 620 aa18.56■□□□□ 0.56
CMTM3-210ENST00000565666 TAB3Q8N5C8 712 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-210ENST00000565666 GPBAR1Q8TDU6 330 aa18.56■□□□□ 0.56
CMTM3-210ENST00000565666 MAIP1Q8WWC4 291 aa18.56■□□□□ 0.56
CMTM3-210ENST00000565666 GATA6Q92908 595 aa18.56■□□□□ 0.56
CMTM3-210ENST00000565666 PLEKHG4BQ96PX9 1271 aa18.56■□□□□ 0.56
CMTM3-210ENST00000565666 KCNF1Q9H3M0 494 aa18.56■□□□□ 0.56
CMTM3-210ENST00000565666 VPS18Q9P253 973 aa18.56■□□□□ 0.56
CMTM3-210ENST00000565666 ZNHIT2Q9UHR6 403 aa18.56■□□□□ 0.56
CMTM3-210ENST00000565666 CNOT6Q9ULM6 557 aaKnown RBP18.56■□□□□ 0.56
CMTM3-210ENST00000565666 OAS3Q9Y6K5 1087 aaKnown RBP18.56■□□□□ 0.56
CMTM3-210ENST00000565666 PLXNB3Q9ULL4 1909 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 STX7O15400 261 aaKnown RBP18.55■□□□□ 0.56
CMTM3-210ENST00000565666 BUD23O43709 281 aaKnown RBP18.55■□□□□ 0.56
CMTM3-210ENST00000565666 OPA1O60313 960 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 METTL18O95568 372 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 IFNB1P01574 187 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 FGGP02679 453 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 AK4P27144 223 aaPredicted RBP18.55■□□□□ 0.56
CMTM3-210ENST00000565666 CXCR5P32302 372 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 SPAM1P38567 509 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 INSM1Q01101 510 aaPredicted RBP18.55■□□□□ 0.56
CMTM3-210ENST00000565666 CTBSQ01459 385 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 PEX6Q13608 980 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 OASLQ15646 514 aaKnown RBP18.55■□□□□ 0.56
CMTM3-210ENST00000565666 PYCR3Q53H96 274 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 PERM1Q5SV97 790 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 SLC30A9Q6PML9 568 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 PHYKPLQ8IUZ5 450 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 SCARF2Q96GP6 870 aaPredicted RBP18.55■□□□□ 0.56
CMTM3-210ENST00000565666 ARFGAP3Q9NP61 516 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 IL17CQ9P0M4 197 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 CLCA2Q9UQC9 943 aa18.55■□□□□ 0.56
CMTM3-210ENST00000565666 C2orf81A6NN90 581 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 PSMD3O43242 534 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 ACTR1BP42025 376 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 ACTR1AP61163 376 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 TAF1AQ15573 450 aaPredicted RBP18.54■□□□□ 0.56
CMTM3-210ENST00000565666 LONRF2Q1L5Z9 754 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 NRROSQ86YC3 692 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 REXO1L1PQ8IX06 675 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 GDAP1Q8TB36 358 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 GLYATL1Q969I3 302 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 SYNDIG1Q9H7V2 258 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 LRRC40Q9H9A6 602 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 RMI1Q9H9A7 625 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.54■□□□□ 0.564e-6■■□□□ 12.2
CMTM3-210ENST00000565666 TAAR2Q9P1P5 351 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 PRKAB1Q9Y478 270 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 JRKLQ9Y4A0 524 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 PLEKHM1Q9Y4G2 1056 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 ARL5AQ9Y689 179 aa18.54■□□□□ 0.56
CMTM3-210ENST00000565666 DNAJC6O75061 913 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 PPFIA2O75334 1257 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 CRTAMO95727 393 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 MT-CO3P00414 261 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 LPOP22079 712 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-210ENST00000565666 TARDBPQ13148 414 aaKnown RBP eCLIP18.53■□□□□ 0.56
CMTM3-210ENST00000565666 LRP8Q14114 963 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 CCNG2Q16589 344 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 ZNF648Q5T619 568 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-210ENST00000565666 OGFOD3Q6PK18 319 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 FAM151BQ6UXP7 276 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 CHST15Q7LFX5 561 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-210ENST00000565666 KLHDC8BQ8IXV7 354 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 CCDC89Q8N998 374 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 GPR156Q8NFN8 814 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 OR6C4Q8NGE1 309 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 ZDHHC1Q8WTX9 485 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 CCDC74AQ96AQ1 378 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 RTP4Q96DX8 246 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 CCDC3Q9BQI4 270 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 TMEM121BQ9BXQ6 578 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-210ENST00000565666 OR2AG1Q9H205 316 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 TRIM39Q9HCM9 518 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 SPATS2LQ9NUQ6 558 aaKnown RBP18.53■□□□□ 0.56
CMTM3-210ENST00000565666 TRMT1Q9NXH9 659 aaKnown RBP18.53■□□□□ 0.56
CMTM3-210ENST00000565666 ATXN10Q9UBB4 475 aa18.53■□□□□ 0.56
CMTM3-210ENST00000565666 FEZ2Q9UHY8 353 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-210ENST00000565666 GLYATL1P3A0A0U1RQE8 302 aa18.52■□□□□ 0.56
CMTM3-210ENST00000565666 E7EVH7 732 aa18.52■□□□□ 0.56
CMTM3-210ENST00000565666 NOBOXO60393 691 aa18.52■□□□□ 0.56
CMTM3-210ENST00000565666 MSNP26038 577 aaKnown RBP18.52■□□□□ 0.56
CMTM3-210ENST00000565666 LMAN1P49257 510 aa18.52■□□□□ 0.56
CMTM3-210ENST00000565666 BIRC2Q13490 618 aa18.52■□□□□ 0.56
CMTM3-210ENST00000565666 SIX1Q15475 284 aaPredicted RBP18.52■□□□□ 0.56
CMTM3-210ENST00000565666 ATP13A5Q4VNC0 1218 aa18.52■□□□□ 0.56
CMTM3-210ENST00000565666 C14orf28Q4W4Y0 310 aa18.52■□□□□ 0.56
CMTM3-210ENST00000565666 KCTD11Q693B1 232 aa18.52■□□□□ 0.56
CMTM3-210ENST00000565666 PDCD7Q8N8D1 485 aaKnown RBP18.52■□□□□ 0.56
CMTM3-210ENST00000565666 BRSK1Q8TDC3 778 aa18.52■□□□□ 0.56
CMTM3-210ENST00000565666 PDLIM2Q96JY6 352 aa18.52■□□□□ 0.56
CMTM3-210ENST00000565666 VPS35Q96QK1 796 aa18.52■□□□□ 0.56
CMTM3-210ENST00000565666 IL26Q9NPH9 171 aa18.52■□□□□ 0.56
CMTM3-210ENST00000565666 ZKSCAN5Q9Y2L8 839 aa18.52■□□□□ 0.56
CMTM3-210ENST00000565666 MYLKQ15746 1914 aa18.51■□□□□ 0.55
CMTM3-210ENST00000565666 GRID2O43424 1007 aa18.51■□□□□ 0.55
CMTM3-210ENST00000565666 NUAK1O60285 661 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms