RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ITGA9Q13797 1035 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 GTF2H3Q13889 308 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 IHHQ14623 411 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 PTPRRQ15256 657 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 TAF1AQ15573 450 aaPredicted RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 PARP6Q2NL67 630 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 C14orf28Q4W4Y0 310 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 PYCR3Q53H96 274 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 SIRPB2Q5JXA9 342 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 ZNF569Q5MCW4 686 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 MEI1Q5TIA1 1274 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 ALS2CLQ60I27 953 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 GUSBP11Q6P575 273 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 SLC30A9Q6PML9 568 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 RBM44Q6ZP01 1051 aaKnown RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 MARK2Q7KZI7 788 aaKnown RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 CHST15Q7LFX5 561 aaPredicted RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 GSTA5Q7RTV2 222 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 EFL1Q7Z2Z2 1120 aaKnown RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 LINC00523Q86TU6 105 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 SLC35F3Q8IY50 421 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 LSMEM2Q8N112 164 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 SLC25A41Q8N5S1 370 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 TRAM1L1Q8N609 369 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 DCBLD1Q8N8Z6 715 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 FAM71DQ8N9W8 422 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 KDF1Q8NAX2 398 aaPredicted RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 AVL9Q8NBF6 648 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 CCDC110Q8TBZ0 833 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 DTX3LQ8TDB6 740 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 GPBAR1Q8TDU6 330 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 MAIP1Q8WWC4 291 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 ZCCHC14Q8WYQ9 949 aaKnown RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 GATA6Q92908 595 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 TADA1Q96BN2 335 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 MRGPRX2Q96LB1 330 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 PLEKHG4BQ96PX9 1271 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 OR2M4Q96R27 311 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 GFM1Q96RP9 751 aaKnown RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 TRIB3Q96RU7 358 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 NAP1L3Q99457 506 aaPredicted RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 CCDC3Q9BQI4 270 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 TMEM121Q9BTD3 319 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 FRMD8Q9BZ67 464 aaPredicted RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 STRADBQ9C0K7 418 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 NRSN2Q9GZP1 204 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 CLPBQ9H078 707 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 ZMYND15Q9H091 742 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 SYNDIG1Q9H7V2 258 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 LRRC40Q9H9A6 602 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 TRIM39Q9HCM9 518 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 HOMER3Q9NSC5 361 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 AKAP7Q9P0M2 348 aaPredicted RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 TAAR2Q9P1P5 351 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 LRIT1Q9P2V4 623 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 APPL1Q9UKG1 709 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 PNMA8BQ9ULN7 279 aaPredicted RBP4.34□□□□□ -1.71
SNX1-205ENST00000559339 ZNF148Q9UQR1 794 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 ZKSCAN5Q9Y2L8 839 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 PPP2R2CQ9Y2T4 447 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 TMEM98Q9Y2Y6 226 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 JRKLQ9Y4A0 524 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 ADAMTS9Q9P2N4 1935 aa4.34□□□□□ -1.71
SNX1-205ENST00000559339 CHD8Q9HCK8 2581 aa4.34□□□□□ -1.72
SNX1-205ENST00000559339 CEP295Q9C0D2 2601 aa4.34□□□□□ -1.72
SNX1-205ENST00000559339 ASPMQ8IZT6 3477 aa4.34□□□□□ -1.72
SNX1-205ENST00000559339 PLXNA2O75051 1894 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 NYNRINQ9P2P1 1898 aaKnown RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 LY6G6EA0A0G2JKS1 128 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 KIR2DS5A0A0G2JLQ3 304 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 A0A0G2JNG1 304 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 GLYATL1P3A0A0U1RQE8 302 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 A0A0U1RQJ8 604 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 KLHL33A6NCF5 533 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 OR5K4A6NMS3 321 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 ERI2A8K979 691 aaKnown RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 FADS2P1A8MWK0 482 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 CFAP99D6REC4 459 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 KIR2DS3K7RE56 304 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 AP3B1O00203 1094 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 AURKAO14965 403 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 KMOO15229 486 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 RRP8O43159 456 aaKnown RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 KIF5CO60282 957 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 NUAK1O60285 661 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 DNAJC6O75061 913 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 USP12O75317 370 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 AGTP01019 485 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 RPLP0P05388 317 aaKnown RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 CELA2BP08218 269 aaPredicted RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 MYF5P13349 255 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 ACP5P13686 325 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 BPIP17213 487 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 AK4P27144 223 aaPredicted RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 PSMB4P28070 264 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 RBMS1P29558 406 aaKnown RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 ALDH4A1P30038 563 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 AKT1P31749 480 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 FDFT1P37268 417 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 ADCY8P40145 1251 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms