RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 INPP4BO15327 924 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 LRCH4O75427 683 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 EML2O95834 649 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 ANKRD34CP0C6C1 535 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 SERPINB6P35237 376 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 CD97P48960 835 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 PTSQ03393 145 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 ITKQ08881 620 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 ATP1A1-AS1Q5TC04 95 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 IYDQ6PHW0 289 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 RFLNAQ6ZTI6 216 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 CYP4V2Q6ZWL3 525 aaPredicted RBP14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 PLXDC1Q8IUK5 500 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 RAVER1Q8IY67 606 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 ERGIC2Q96RQ1 377 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 RIOK2Q9BVS4 552 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 ULBP3Q9BZM4 244 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 RMI1Q9H9A7 625 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 TBC1D29Q9UFV1 150 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 KCNMB2Q9Y691 235 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 SCINQ9Y6U3 715 aa14.06□□□□□ -0.16
CHMP1A-210ENST00000551981 KIR2DS5A0A0G2JLQ3 304 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 A0A0G2JNG1 304 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 A0A0J9YYE9 177 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 OR5K4A6NMS3 321 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 KIR2DS3K7RE56 304 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 MTSS1O43312 755 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 SNX2O60749 519 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 TRBC1P01850 177 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 PDHA1P08559 390 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 F3P13726 295 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 AMPD1P23109 780 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 PCK1P35558 622 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 DLSTP36957 453 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 STC1P52823 247 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 FOXM1Q08050 763 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 KIR2DS5Q14953 304 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 DPYSL2Q16555 572 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 TCTN3Q6NUS6 607 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 C6orf15Q6UXA7 325 aaPredicted RBP14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 LYSMD3Q7Z3D4 306 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 PHYKPLQ8IUZ5 450 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 AGAP2Q99490 1192 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 POLR1EQ9GZS1 481 aaKnown RBP14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 NT5MQ9NPB1 228 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 PRDM8Q9NQV8 689 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 ETNK2Q9NVF9 386 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 HAUS2Q9NVX0 235 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 LIMA1Q9UHB6 759 aaKnown RBP14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 POLHQ9Y253 713 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 KCNK6Q9Y257 313 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 PRKAB1Q9Y478 270 aa14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 MRPS18BQ9Y676 258 aaKnown RBP14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 PRRC2CQ9Y520 2896 aaKnown RBP14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 MN1Q10571 1320 aaPredicted RBP14.05□□□□□ -0.16
CHMP1A-210ENST00000551981 ZNF106Q9H2Y7 1883 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 A0A0U1RQS6 177 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 LILRA5A6NI73 299 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 FZD6O60353 706 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 DNAJC6O75061 913 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 RFPL1O75677 317 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 ATP1A1P05023 1023 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 ACP5P13686 325 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 CA4P22748 312 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 CES1P23141 567 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 BOLA3Q53S33 107 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 ASB18Q6ZVZ8 466 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 IRF2BP2Q7Z5L9 587 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 POLNQ7Z5Q5 900 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 LRRC49Q8IUZ0 686 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 CCDC13Q8IYE1 715 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 HSPH1Q92598 858 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 STAMBPL1Q96FJ0 436 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 CSPG4P5Q96PW8 444 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 TRIM7Q9C029 511 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 MRPL47Q9HD33 250 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 SIDT1Q9NXL6 827 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 CPNE7Q9UBL6 633 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 KCND3Q9UK17 655 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 CROTQ9UKG9 612 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 MYO6Q9UM54 1294 aa14.04□□□□□ -0.16
CHMP1A-210ENST00000551981 ICE1Q9Y2F5 2266 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 CENPEQ02224 2701 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 A6NCN8 305 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 TOX3O15405 576 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 VPS4BO75351 444 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 KRT7P08729 469 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 CDK11BP21127 795 aaKnown RBP14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 MLLT10P55197 1068 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 ERV3-1Q14264 604 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 IL11RAQ14626 422 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 SMTNL2Q2TAL5 461 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 TEX26Q8N6G2 289 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 EFCAB3Q8N7B9 438 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 ZNF653Q96CK0 615 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 TRIM11Q96F44 468 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 C9orf72Q96LT7 481 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 SYT11Q9BT88 431 aa14.03□□□□□ -0.16
CHMP1A-210ENST00000551981 TBC1D10AQ9BXI6 508 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms