RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SYT10Q6XYQ8 523 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CYHR1Q6ZMK1 362 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 TPRG1Q6ZUI0 275 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 POF1BQ8WVV4 589 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CPA5Q8WXQ8 436 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 USP7Q93009 1102 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 WBP2Q969T9 261 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 FBXL8Q96CD0 374 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 BIRC8Q96P09 236 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CENPOQ9BU64 300 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 LGR4Q9BXB1 951 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 GSX2Q9BZM3 304 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ZDHHC5Q9C0B5 715 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 MTRF1LQ9UGC7 380 aaKnown RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 MAGED2Q9UNF1 606 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ICKQ9UPZ9 632 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 B3GALT1Q9Y5Z6 326 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 A0A1W2PR77 199 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 EPOPA6NHQ4 379 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 MEN1O00255 615 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CEP104O60308 925 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 MT-CO1P00395 513 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 C9P02748 559 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ENO1P06733 434 aaKnown RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 PNMA6AP0CW24 399 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 MYBL2P10244 700 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 DLATP10515 647 aaKnown RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 BMP2P12643 396 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 SRCP12931 536 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ITPKAP23677 461 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CCR2P41597 374 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 BRCC3P46736 316 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 MARCKSL1P49006 195 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CACNG1Q06432 222 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ZBTB17Q13105 803 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 GPM6BQ13491 265 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 RIPK1Q13546 671 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 HIF1AQ16665 826 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CARD16Q5EG05 197 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 KLHL10Q6JEL2 608 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 TMEM214Q6NUQ4 689 aaKnown RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 PHYKPLQ8IUZ5 450 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 TDRD5Q8NAT2 981 aaKnown RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ACTL9Q8TC94 416 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CXorf40AQ8TE69 158 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 PMEPA1Q969W9 287 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 TM4SF19Q96DZ7 209 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ZSCAN5AQ9BUG6 496 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 RNF38Q9H0F5 515 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 MEAF6Q9HAF1 191 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 LRRC4CQ9HCJ2 640 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 TDP1Q9NUW8 608 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 TAS2R7Q9NYW3 318 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CTTNBP2NLQ9P2B4 639 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 PSMC3IPQ9P2W1 217 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 TRIM10Q9UDY6 481 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 GPN3Q9UHW5 284 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 LSM7Q9UK45 103 aaKnown RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ATE1O95260 518 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 MAP3K6O95382 1288 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 PSMG1O95456 288 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 RHOP08100 348 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 JMJD7P0C870 316 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 LPOP22079 712 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-212ENST00000549162 KCNJ1P48048 391 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 GNG11P61952 73 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 SLC5A12Q1EHB4 618 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 FAM171A1Q5VUB5 890 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 ZYG11AQ6WRX3 759 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 UNC5AQ6ZN44 842 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 EFL1Q7Z2Z2 1120 aaKnown RBP4.86□□□□□ -1.63
SCAF11-212ENST00000549162 CILP2Q8IUL8 1156 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 VPS52Q8N1B4 723 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 ARFGAP2Q8N6H7 521 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 PAPD5Q8NDF8 572 aaKnown RBP4.86□□□□□ -1.63
SCAF11-212ENST00000549162 EZH1Q92800 747 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-212ENST00000549162 NCLNQ969V3 563 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 RSPRY1Q96DX4 576 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 MTERF3Q96E29 417 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 TMEM169Q96HH4 297 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 GUCD1Q96NT3 240 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 TUBB6Q9BUF5 446 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 MAGEB5Q9BZ81 275 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 TCF7L1Q9HCS4 588 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 MMP17Q9ULZ9 603 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 SPEF1Q9Y4P9 236 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 F5H5T6 163 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 TBX10O75333 385 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 SEMA3DO95025 777 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 FGGP02679 453 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 KRT1P04264 644 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 SEMG1P04279 462 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 CYP2A6P11509 494 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-212ENST00000549162 GRK2P25098 689 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 PIK3CGP48736 1102 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 VSNL1P62760 191 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 TAF10Q12962 218 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 PDE7AQ13946 482 aa4.86□□□□□ -1.63
SCAF11-212ENST00000549162 SHHQ15465 462 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms