RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 PCDH9Q9HC56 1237 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 CNGB3Q9NQW8 809 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 MCM9Q9NXL9 1143 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 GRHPRQ9UBQ7 328 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 SZT2Q5T011 3432 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 RGPD5Q99666 1765 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 PASKQ96RG2 1323 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 ROCK1Q13464 1354 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 PALLDQ8WX93 1383 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 C5P01031 1676 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 NSD3Q9BZ95 1437 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 DOT1LQ8TEK3 1739 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 ABHD14A-ACY1A0A1B0GW23 586 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 PMS2P5A8MQ11 134 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 AKR1B15C9JRZ8 316 aaPredicted RBP3.87□□□□□ -1.79
CNOT2-216ENST00000548939 DVL1O14640 695 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 ANP32CO43423 234 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 SLC2A4P14672 509 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 USP8P40818 1118 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 DVL1P1P54792 670 aaPredicted RBP3.87□□□□□ -1.79
CNOT2-216ENST00000548939 SEC61BP60468 96 aaKnown RBP3.87□□□□□ -1.79
CNOT2-216ENST00000548939 CTF1Q16619 201 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 MMEL1Q495T6 779 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 CTXN3Q4LDR2 81 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 CCSAPQ6IQ19 270 aaPredicted RBP3.87□□□□□ -1.79
CNOT2-216ENST00000548939 JMJD6Q6NYC1 403 aaPredicted RBP3.87□□□□□ -1.79
CNOT2-216ENST00000548939 KMT5CQ86Y97 462 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 SVIPQ8NHG7 77 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 SLC20A1Q8WUM9 679 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 RAB40AQ8WXH6 277 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 LITAFQ99732 161 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 LMAN2LQ9H0V9 348 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 SMYD2Q9NRG4 433 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 USP54Q70EL1 1684 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 NSD2O96028 1365 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 LY75O60449 1722 aa3.87□□□□□ -1.79
CNOT2-216ENST00000548939 ARFGEF1Q9Y6D6 1849 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 SBF1O95248 1867 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 EXTL3O43909 919 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 FAM155BO75949 473 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 TK1P04183 234 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 WEE2P0C1S8 567 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 PPIGQ13427 754 aaKnown RBP eCLIP3.86□□□□□ -1.79
CNOT2-216ENST00000548939 DSELQ8IZU8 1212 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 CNTROBQ8N137 903 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 TMEM57Q8N5G2 664 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 SCCPDHQ8NBX0 429 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 ZNF248Q8NDW4 579 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 AGBL3Q8NEM8 1001 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 LGALS12Q96DT0 336 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 ZNF570Q96NI8 536 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 CLSTN3Q9BQT9 956 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.86□□□□□ -1.79
CNOT2-216ENST00000548939 TMEM30AQ9NV96 361 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 FAM118AQ9NWS6 357 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 TINAGQ9UJW2 476 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 GDAQ9Y2T3 454 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 SMAD5-AS1Q9Y6J3 95 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 C4BP0C0L5 1744 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 TIAM2Q8IVF5 1701 aa3.86□□□□□ -1.79
CNOT2-216ENST00000548939 TRIOBPQ9H2D6 2365 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 KIAA1551Q9HCM1 1747 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 KLK8O60259 260 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 ZNF500O60304 480 aaPredicted RBP3.85□□□□□ -1.79
CNOT2-216ENST00000548939 TUBBP07437 444 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 ITGA2P17301 1181 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 RFC4P35249 363 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 ADD2P35612 726 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 GNL1P36915 607 aaPredicted RBP3.85□□□□□ -1.79
CNOT2-216ENST00000548939 TBX4P57082 545 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 TUBB4BP68371 445 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 SLC1A5Q15758 541 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 ZNF876PQ49A33 203 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 RGMBQ6NW40 437 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 MYLK4Q86YV6 388 aaPredicted RBP3.85□□□□□ -1.79
CNOT2-216ENST00000548939 WDR63Q8IWG1 891 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 CHERPQ8IWX8 916 aaKnown RBP3.85□□□□□ -1.79
CNOT2-216ENST00000548939 KIAA2013Q8IYS2 634 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 OR10V1Q8NGI7 309 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 AFG1LQ8WV93 481 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 ABTB1Q969K4 478 aaPredicted RBP3.85□□□□□ -1.79
CNOT2-216ENST00000548939 MXRA8Q9BRK3 442 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 HAUS8Q9BT25 410 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 LRRC1Q9BTT6 524 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 EPHX3Q9H6B9 360 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 PADI1Q9ULC6 663 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 FAF1Q9UNN5 650 aaPredicted RBP3.85□□□□□ -1.79
CNOT2-216ENST00000548939 AMDHD2Q9Y303 409 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 SLIT3O75094 1523 aa3.85□□□□□ -1.79
CNOT2-216ENST00000548939 KIF13BQ9NQT8 1826 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 PABPN1LA6NDY0 278 aaKnown RBP3.84□□□□□ -1.79
CNOT2-216ENST00000548939 PER2O15055 1255 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 MAP2K2P36507 400 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 CLCNKAP51800 687 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 CLDN2P57739 230 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 ACTR2P61160 394 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 PDSS1Q5T2R2 415 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 ARHGAP17Q68EM7 881 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 TRNP1Q6NT89 227 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 C1orf228Q6PIY5 440 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms