RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 TXNRD3Q86VQ6 643 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 SIAH3Q8IW03 269 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 DHX40Q8IX18 779 aaKnown RBP5.55□□□□□ -1.52
DDB1-219ENST00000541513 ABRAQ8N0Z2 381 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 PDCL2Q8N4E4 241 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 DCLK2Q8N568 766 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 SIRT6Q8N6T7 355 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 NIPA2Q8N8Q9 360 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 BANPQ8N9N5 519 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 RNF169Q8NCN4 708 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 TMIEQ8NEW7 156 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 NUP43Q8NFH3 380 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 OR52E1Q8NGJ3 308 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 OR10S1Q8NGN2 331 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 C9orf43Q8TAL5 461 aaPredicted RBP5.55□□□□□ -1.52
DDB1-219ENST00000541513 SUN5Q8TC36 379 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 GANCQ8TET4 914 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 TEKT4Q8WW24 435 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 METTL21AQ8WXB1 218 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 MIB2Q96AX9 1013 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 PEX11GQ96HA9 241 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 DHTKD1Q96HY7 919 aaPredicted RBP5.55□□□□□ -1.52
DDB1-219ENST00000541513 AJUBAQ96IF1 538 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 EPSTI1Q96J88 318 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 FAR2Q96K12 515 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 FAM84BQ96KN1 310 aaPredicted RBP5.55□□□□□ -1.52
DDB1-219ENST00000541513 HSPA12BQ96MM6 686 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 SLC46A1Q96NT5 459 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 SEMA3CQ99985 751 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 CCDC77Q9BR77 488 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 INPP5KQ9BT40 448 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 TLR10Q9BXR5 811 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 LRRCC1Q9C099 1032 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 COA1Q9GZY4 146 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 NACA2Q9H009 215 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 KATNBL1Q9H079 304 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 EPB41L4BQ9H329 900 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 PLK3Q9H4B4 646 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 GORASP2Q9H8Y8 452 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 CD209Q9NNX6 404 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 PIH1D3Q9NQM4 214 aaKnown RBP5.55□□□□□ -1.52
DDB1-219ENST00000541513 C20orf141Q9NUB4 165 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 HAO2Q9NYQ3 351 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 MAGEL2Q9UJ55 1249 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 VAV3Q9UKW4 847 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 SSX2IPQ9Y2D8 614 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 STRAPQ9Y3F4 350 aaKnown RBP5.55□□□□□ -1.52
DDB1-219ENST00000541513 PCDHB7Q9Y5E2 793 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 PDS5AQ29RF7 1337 aaKnown RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 TBC1D3DA0A087WVF3 549 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TBC1D3IA0A087WXS9 549 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TBC1D3EA0A087X179 549 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TBC1D3KA0A087X1G2 549 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 FAM230AA0A1W2PPH8 454 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 A0A1W2PQ27 194 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 A0A1W2PQ64 194 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 A0A1W2PQC6 194 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 A0A1W2PQD8 194 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 ELOVL7A1L3X0 281 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TBC1D3BA6NDS4 549 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TBC1D3FA6NER0 549 aaPredicted RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 WIPF3A6NGB9 483 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 YDJCA8MPS7 323 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TBC1D3LB9A6J9 549 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 ADM5C9JUS6 153 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 E2F3O00716 465 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 EIF3DO15371 548 aaKnown RBP eCLIP5.54□□□□□ -1.52
DDB1-219ENST00000541513 SMAD6O43541 496 aaKnown RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 PRICKLE3O43900 615 aaPredicted RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 CACNG3O60359 315 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 AK1P00568 194 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 MT-ATP6P00846 226 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 CYBBP04839 570 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 GALTP07902 379 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TBC1D3HP0C7X1 549 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 RAP2AP10114 183 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 VCLP18206 1134 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 ATP5JP18859 108 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 ITIH1P19827 911 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 ACP1P24666 158 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 MAP4P27816 1152 aaKnown RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 CTNNB1P35222 781 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 HSD17B2P37059 387 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 GSTM5P46439 218 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 GYG1P46976 350 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TOB1P50616 345 aaPredicted RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 PGDP52209 483 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 METAP1P53582 386 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 OXCT1P55809 520 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 LOXL3P58215 753 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TIMM10P62072 90 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 FKBP1AP62942 108 aaKnown RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 TLE3Q04726 772 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 DDX39BQ13838 428 aaKnown RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 LPIN1Q14693 890 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 ARHGEF6Q15052 776 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 PCOLCEQ15113 449 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 STK11Q15831 433 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 CNGA3Q16281 694 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 SOWAHCQ53LP3 525 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms