RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 IL17FQ96PD4 163 aa4.28□□□□□ -1.72
RAP1B-224ENST00000541216 DUX5Q96PT3 197 aa4.28□□□□□ -1.72
RAP1B-224ENST00000541216 CMKLR1Q99788 373 aa4.28□□□□□ -1.72
RAP1B-224ENST00000541216 CHCHD6Q9BRQ6 235 aa4.28□□□□□ -1.72
RAP1B-224ENST00000541216 HCFC1R1Q9NWW0 138 aa4.28□□□□□ -1.72
RAP1B-224ENST00000541216 KCNS2Q9ULS6 477 aa4.28□□□□□ -1.72
RAP1B-224ENST00000541216 SMARCA2P51531 1590 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 ARHGEF40Q8TER5 1519 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 ATP2A1O14983 1001 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 SPINT2O43291 252 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 SNRNP70P08621 437 aaKnown RBP4.27□□□□□ -1.73
RAP1B-224ENST00000541216 TGFB3P10600 412 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 HLA-DOBP13765 273 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 ACADLP28330 430 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 CORO1AP31146 461 aaKnown RBP4.27□□□□□ -1.73
RAP1B-224ENST00000541216 TAS2R40P59535 323 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 ZBED6P86452 979 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 GOLGA8DPQ0D2H9 430 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 ASTE1Q2TB18 679 aaPredicted RBP4.27□□□□□ -1.73
RAP1B-224ENST00000541216 KCNT1Q5JUK3 1230 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 JADE1Q6IE81 842 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 TMEM219Q86XT9 240 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 ODF3L1Q8IXM7 274 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 PDILTQ8N807 584 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 ACVR1CQ8NER5 493 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 OR5R1Q8NH85 324 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 HMGCLL1Q8TB92 370 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 SLC20A1Q8WUM9 679 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 FIG4Q92562 907 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 TAAR8Q969N4 342 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 TMEM19Q96HH6 336 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 HARBI1Q96MB7 349 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 CSTL1Q9H114 145 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 KLHL1Q9NR64 748 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 KRT84Q9NSB2 600 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 RRP7BPQ9NSQ0 103 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 BLOC1S4Q9NUP1 217 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 MTMR10Q9NXD2 777 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 LOXL2Q9Y4K0 774 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 LYVE1Q9Y5Y7 322 aa4.27□□□□□ -1.73
RAP1B-224ENST00000541216 NESP48681 1621 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 IGHV4OR15-8A0A075B7B6 117 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 HNRNPCL2B2RXH8 293 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 PRAC2D3DTV9 90 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 M0QZ24 198 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 NDUFS3O75489 264 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 DAB1O75553 588 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 ARL3P36405 182 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 RRP1P56182 461 aaKnown RBP4.26□□□□□ -1.73
RAP1B-224ENST00000541216 TAS2R38P59533 333 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 ERVFC1-1P60608 527 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 MRPS34P82930 218 aaKnown RBP4.26□□□□□ -1.73
RAP1B-224ENST00000541216 RELQ04864 619 aaPredicted RBP4.26□□□□□ -1.73
RAP1B-224ENST00000541216 RUNX1T1Q06455 604 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 GKAP1Q5VSY0 366 aaPredicted RBP4.26□□□□□ -1.73
RAP1B-224ENST00000541216 KLHL35Q6PF15 583 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 SARM1Q6SZW1 724 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 CFAP77Q6ZQR2 320 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 ZNF771Q7L3S4 317 aaPredicted RBP4.26□□□□□ -1.73
RAP1B-224ENST00000541216 HJURPQ8NCD3 748 aaPredicted RBP4.26□□□□□ -1.73
RAP1B-224ENST00000541216 LNX1Q8TBB1 728 aaPredicted RBP4.26□□□□□ -1.73
RAP1B-224ENST00000541216 NR4A3Q92570 626 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 ZKSCAN4Q969J2 545 aaPredicted RBP4.26□□□□□ -1.73
RAP1B-224ENST00000541216 CMTM3Q96MX0 182 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 OR2A14Q96R47 310 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 TREX2Q9BQ50 279 aaPredicted RBP4.26□□□□□ -1.73
RAP1B-224ENST00000541216 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 PIGMQ9H3S5 423 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 MAGIXQ9H6Y5 334 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 UBTD1Q9HAC8 227 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 SEPT11Q9NVA2 429 aaKnown RBP4.26□□□□□ -1.73
RAP1B-224ENST00000541216 SETD4Q9NVD3 440 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 COPG2Q9UBF2 871 aa4.26□□□□□ -1.73
RAP1B-224ENST00000541216 SAA2-SAA4A0A096LPE2 208 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 A0A0G2JPF8 293 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 LILRA5A6NI73 299 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 HNRNPCL3B7ZW38 293 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 FAM90A26D6RGX4 464 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 DOK2O60496 412 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 HNRNPCL1O60812 293 aaKnown RBP4.25□□□□□ -1.73
RAP1B-224ENST00000541216 TIPRLO75663 272 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 ICAM1P05362 532 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 HNRNPCL4P0DMR1 293 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 ITGA2P17301 1181 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 GABRB1P18505 474 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 UGT1A1P22309 533 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 HADHAP40939 763 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 GARSP41250 739 aaKnown RBP4.25□□□□□ -1.73
RAP1B-224ENST00000541216 TMPOP42166 694 aaKnown RBP4.25□□□□□ -1.73
RAP1B-224ENST00000541216 GAS1P54826 345 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 CLDN20P56880 219 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 HILS1P60008 231 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 FOXM1Q08050 763 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 MAPRE1Q15691 268 aaKnown RBP4.25□□□□□ -1.73
RAP1B-224ENST00000541216 PNLIPRP3Q17RR3 467 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 ZNF805Q5CZA5 627 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 DCST1Q5T197 706 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 NSUN5P2Q63ZY6 315 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 C18orf63Q68DL7 685 aa4.25□□□□□ -1.73
RAP1B-224ENST00000541216 TUBA1AQ71U36 451 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms