RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 BBS12Q6ZW61 710 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 SPRED1Q7Z699 444 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 PELI3Q8N2H9 469 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 TRAM1L1Q8N609 369 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 CCDC112Q8NEF3 446 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 CCL4L1Q8NHW4 92 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 SCARF2Q96GP6 870 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-210ENST00000531516 COX14Q96I36 57 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 SLC46A1Q96NT5 459 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 HEMGNQ9BXL5 484 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 ZCCHC2Q9C0B9 1178 aaKnown RBP12.48□□□□□ -0.41
C11orf54-210ENST00000531516 CARD9Q9H257 536 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 SPATS2LQ9NUQ6 558 aaKnown RBP12.48□□□□□ -0.41
C11orf54-210ENST00000531516 SAE1Q9UBE0 346 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-210ENST00000531516 RSPH14Q9UHP6 348 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 AMFRQ9UKV5 643 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 SHOC2Q9UQ13 582 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 PKP3Q9Y446 797 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 ZNF711Q9Y462 761 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 PCDHA3Q9Y5H8 950 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 DMXL2Q8TDJ6 3036 aa12.48□□□□□ -0.41
C11orf54-210ENST00000531516 DOCK9Q9BZ29 2069 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 A0A0U1RQS6 177 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 OR5K4A6NMS3 321 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 TLX3O43711 291 aaPredicted RBP12.47□□□□□ -0.41
C11orf54-210ENST00000531516 PPFIA2O75334 1257 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 MT-CYBP00156 380 aaPredicted RBP12.47□□□□□ -0.41
C11orf54-210ENST00000531516 PECAM1P16284 738 aaPredicted RBP12.47□□□□□ -0.41
C11orf54-210ENST00000531516 HLA-DPA1P20036 260 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 CTNNA1P35221 906 aaKnown RBP12.47□□□□□ -0.41
C11orf54-210ENST00000531516 GEMP55040 296 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 WNT3AP56704 352 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 PHF19Q5T6S3 580 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 ALS2CLQ60I27 953 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 RFLNAQ6ZTI6 216 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 CHST15Q7LFX5 561 aaPredicted RBP12.47□□□□□ -0.41
C11orf54-210ENST00000531516 PEX26Q7Z412 305 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 TMC3Q7Z5M5 1100 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 TRIM74Q86UV6 250 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 JAMLQ86YT9 394 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 TTC13Q8NBP0 860 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 OR10G6Q8NH81 332 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 SPATA22Q8NHS9 363 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 GDAP1Q8TB36 358 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 UBE2Q2Q8WVN8 375 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 QKIQ96PU8 341 aaKnown RBP eCLIP12.47□□□□□ -0.41
C11orf54-210ENST00000531516 FCRL5Q96RD9 977 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 TRIB3Q96RU7 358 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 AGAP2Q99490 1192 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 SLC38A3Q99624 504 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 HERPUD2Q9BSE4 406 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.47□□□□□ -0.41
C11orf54-210ENST00000531516 OSBPL8Q9BZF1 889 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 GOLPH3Q9H4A6 298 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 TRIM39Q9HCM9 518 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 WDR70Q9NW82 654 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 KCNK4Q9NYG8 393 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 UBP1Q9NZI7 540 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 AAR2Q9Y312 384 aaKnown RBP12.47□□□□□ -0.41
C11orf54-210ENST00000531516 PTPRBP23467 1997 aa12.47□□□□□ -0.41
C11orf54-210ENST00000531516 KNTC1P50748 2209 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 MIF4GDA9UHW6 222 aaKnown RBP12.46□□□□□ -0.41
C11orf54-210ENST00000531516 KLK10O43240 276 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 GRID2O43424 1007 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 NRDCO43847 1150 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 VEGFDO43915 354 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 SOD1P00441 154 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 ATP1A1P05023 1023 aaKnown RBP12.46□□□□□ -0.41
C11orf54-210ENST00000531516 PIRTP0C851 137 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 NFKB1P19838 968 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 FECHP22830 423 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 HMGCLP35914 325 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 MAZP56270 477 aaKnown RBP12.46□□□□□ -0.41
C11orf54-210ENST00000531516 TMPRSS3P57727 454 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 GPLD1P80108 840 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 KCTD16Q68DU8 428 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 DARS2Q6PI48 645 aaKnown RBP12.46□□□□□ -0.41
C11orf54-210ENST00000531516 SLC9B2Q86UD5 537 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 NRROSQ86YC3 692 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 IPMKQ8NFU5 416 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 BRSK1Q8TDC3 778 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 NAF1Q96HR8 494 aaKnown RBP12.46□□□□□ -0.41
C11orf54-210ENST00000531516 PLEKHG4BQ96PX9 1271 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 SMIM14Q96QK8 99 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 FOXP3Q9BZS1 431 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 NFKBIL1Q9UBC1 381 aaPredicted RBP12.46□□□□□ -0.41
C11orf54-210ENST00000531516 RABGEF1Q9UJ41 708 aa12.46□□□□□ -0.41
C11orf54-210ENST00000531516 ANKRD11Q6UB99 2663 aaPredicted RBP12.46□□□□□ -0.41
C11orf54-210ENST00000531516 ZZEF1O43149 2961 aa12.46□□□□□ -0.42
C11orf54-210ENST00000531516 ARID1BQ8NFD5 2236 aaPredicted RBP12.45□□□□□ -0.42
C11orf54-210ENST00000531516 KIR2DS5A0A0G2JLQ3 304 aa12.45□□□□□ -0.42
C11orf54-210ENST00000531516 A0A0G2JNG1 304 aa12.45□□□□□ -0.42
C11orf54-210ENST00000531516 A0A1W2PQM1 296 aa12.45□□□□□ -0.42
C11orf54-210ENST00000531516 KIR2DS3K7RE56 304 aa12.45□□□□□ -0.42
C11orf54-210ENST00000531516 KMOO15229 486 aa12.45□□□□□ -0.42
C11orf54-210ENST00000531516 DUX1O43812 170 aa12.45□□□□□ -0.42
C11orf54-210ENST00000531516 NUAK1O60285 661 aa12.45□□□□□ -0.42
C11orf54-210ENST00000531516 ACP5P13686 325 aa12.45□□□□□ -0.42
C11orf54-210ENST00000531516 CDC25BP30305 580 aa12.45□□□□□ -0.42
C11orf54-210ENST00000531516 PTPN7P35236 360 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms