RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 GRK4P32298 578 aa17.83■□□□□ 0.44
LTBP3-210ENST00000528516 GGT5P36269 586 aa17.83■□□□□ 0.44
LTBP3-210ENST00000528516 DMC1Q14565 340 aa17.83■□□□□ 0.44
LTBP3-210ENST00000528516 FAM126BQ8IXS8 530 aa17.83■□□□□ 0.44
LTBP3-210ENST00000528516 HIST1H2AHQ96KK5 128 aa17.83■□□□□ 0.44
LTBP3-210ENST00000528516 HIST1H2AJQ99878 128 aa17.83■□□□□ 0.44
LTBP3-210ENST00000528516 H2AFJQ9BTM1 129 aa17.83■□□□□ 0.44
LTBP3-210ENST00000528516 TBC1D13Q9NVG8 400 aa17.83■□□□□ 0.44
LTBP3-210ENST00000528516 CCDC162PA2VCL2 907 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 G3V2L1 256 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 GRID2O43424 1007 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 NRP2O60462 931 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 COPZ1P61923 177 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 DGCR6Q14129 220 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 HERC3Q15034 1050 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 PTPRNQ16849 979 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 NT5DC4Q86YG4 428 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 MICU2Q8IYU8 434 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 TBATAQ96M53 351 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 RBBP8Q99708 897 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 SLC25A23Q9BV35 468 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 TRIM64CA6NLI5 447 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 C16orf96A6NNT2 1141 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 SNAP29O95721 258 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 RPS9P46781 194 aaKnown RBP17.82■□□□□ 0.44
LTBP3-210ENST00000528516 SERPINB10P48595 397 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 CLCQ05315 142 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 PCID2Q5JVF3 399 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 CCNYL2Q5T2Q4 361 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 ZNF534Q76KX8 674 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 FSTL5Q8N475 847 aaPredicted RBP17.82■□□□□ 0.44
LTBP3-210ENST00000528516 UPF1Q92900 1129 aaKnown RBP eCLIP17.82■□□□□ 0.44
LTBP3-210ENST00000528516 OSBPL10Q9BXB5 764 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 TRIM8Q9BZR9 551 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 TRHDEQ9UKU6 1024 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 HACD1B0YJ81 288 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 VPS26AO75436 327 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 CPSF4O95639 269 aaKnown RBP17.82■□□□□ 0.44
LTBP3-210ENST00000528516 SLC2A3P11169 496 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 CTPS1P17812 591 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 RAB10P61026 200 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 PIGFQ07326 219 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 ADCK2Q7Z695 626 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 OR7A2PQ8NGA2 310 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 SLCO4A1Q96BD0 722 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 RPL10LQ96L21 214 aaKnown RBP17.82■□□□□ 0.44
LTBP3-210ENST00000528516 FAM105AQ9NUU6 356 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.82■□□□□ 0.44
LTBP3-210ENST00000528516 MTRRQ9UBK8 725 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 NRCAMQ92823 1304 aa17.82■□□□□ 0.44
LTBP3-210ENST00000528516 RHOCP08134 193 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 ABCB1P08183 1280 aaPredicted RBP17.81■□□□□ 0.44
LTBP3-210ENST00000528516 TRIM32Q13049 653 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 PPIL2Q13356 520 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 AP5B1Q2VPB7 878 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 DCLRE1AQ6PJP8 1040 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 TPGS1Q6ZTW0 290 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 SLC26A9Q7LBE3 791 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 TRIM62Q9BVG3 475 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 GIMAP2Q9UG22 337 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 CARD8Q9Y2G2 431 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 BRWD1Q9NSI6 2320 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 XYLBO75191 536 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 LDLRP01130 860 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 ADSLP30566 484 aaPredicted RBP17.81■□□□□ 0.44
LTBP3-210ENST00000528516 ZNF132P52740 706 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 DSC2Q02487 901 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 POC5Q8NA72 575 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 MTMR14Q8NCE2 650 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 PDPRQ8NCN5 879 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 CLHC1Q8NHS4 586 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 SH3KBP1Q96B97 665 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 TSPAN18Q96SJ8 248 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 ACTR8Q9H981 624 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 LIMD1Q9UGP4 676 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 SMCHD1A6NHR9 2005 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 MAGEB16A2A368 324 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 RSL1D1O76021 490 aaKnown RBP17.81■□□□□ 0.44
LTBP3-210ENST00000528516 NTRK1P04629 796 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 EIF2S1P05198 315 aaKnown RBP17.81■□□□□ 0.44
LTBP3-210ENST00000528516 POU1F1P28069 291 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 ALDH7A1P49419 539 aaKnown RBP17.81■□□□□ 0.44
LTBP3-210ENST00000528516 LIMK2P53671 638 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 RHOAP61586 193 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 NIPAL4Q0D2K0 466 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 RFTN1Q14699 578 aaPredicted RBP17.81■□□□□ 0.44
LTBP3-210ENST00000528516 VASH1Q7L8A9 365 aaPredicted RBP17.81■□□□□ 0.44
LTBP3-210ENST00000528516 ANKFN1Q8N957 763 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 CENPNQ96H22 339 aaPredicted RBP17.81■□□□□ 0.44
LTBP3-210ENST00000528516 TRIM54Q9BYV2 358 aa17.81■□□□□ 0.44
LTBP3-210ENST00000528516 IQCF3P0C7M6 154 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 TUFMP49411 452 aaKnown RBP17.8■□□□□ 0.44
LTBP3-210ENST00000528516 BOP1Q14137 746 aaKnown RBP17.8■□□□□ 0.44
LTBP3-210ENST00000528516 PTPRCAPQ14761 206 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 BCL2A1Q16548 175 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 ANKS6Q68DC2 871 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 GLT6D1Q7Z4J2 308 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 TMEM174Q8WUU8 243 aa17.8■□□□□ 0.44
LTBP3-210ENST00000528516 KCTD14Q9BQ13 255 aaPredicted RBP17.8■□□□□ 0.44
LTBP3-210ENST00000528516 HGH1Q9BTY7 390 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms