RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	AK5	Q9Y6K8	562 aa		11.67	□□□□□ -0.54
PSMC3-205	ENST00000528362	RNF215	Q9Y6U7	377 aa		11.67	□□□□□ -0.54
PSMC3-205	ENST00000528362	LRRK1	Q38SD2	2015 aa		11.67	□□□□□ -0.54
PSMC3-205	ENST00000528362	PTPRB	P23467	1997 aa		11.67	□□□□□ -0.54
PSMC3-205	ENST00000528362		A0A1W2PQM1	296 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362		D6RAR5	112 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	NUDT21	O43809	227 aa	Known RBP	11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	USP12	O75317	370 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	ASMTL	O95671	621 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	MPO	P05164	745 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	RPLP0	P05388	317 aa	Known RBP	11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	RBP3	P10745	1247 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	CETN2	P41208	172 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	ACTR1B	P42025	376 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	ACTR1A	P61163	376 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	CCL7	P80098	99 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	MPP3	Q13368	585 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	SPIDR	Q14159	915 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	SLC1A5	Q15758	541 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	ZNF569	Q5MCW4	686 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	CCDC70	Q6NSX1	233 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	SPRED1	Q7Z699	444 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	GALNT13	Q8IUC8	556 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	CCNJL	Q8IV13	435 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	SLC25A41	Q8N5S1	370 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	TRAM1L1	Q8N609	369 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	UBL4B	Q8N7F7	174 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362		Q8N9G6	341 aa	Predicted RBP	11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	PATE1	Q8WXA2	126 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	ATXN7L3B	Q96GX2	97 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	HES6	Q96HZ4	224 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	SRPK1	Q96SB4	655 aa	Known RBP	11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	SPATA16	Q9BXB7	569 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	ARFGAP3	Q9NP61	516 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	RAD18	Q9NS91	495 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	APPL1	Q9UKG1	709 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	PRKAB1	Q9Y478	270 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	ENTPD2	Q9Y5L3	495 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	ZFYVE26	Q68DK2	2539 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	SHROOM3	Q8TF72	1996 aa		11.66	□□□□□ -0.54
PSMC3-205	ENST00000528362	ANKRD36	A6QL64	1941 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	PMS2P1	A4D2B8	440 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	KCNN4	O15554	427 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	TLX3	O43711	291 aa	Predicted RBP	11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	ECEL1	O95672	775 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	HLA-DPA1	P20036	260 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	PSMB4	P28070	264 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	HMGCL	P35914	325 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	GEM	P55040	296 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	GABRE	P78334	506 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	KLF1	Q13351	362 aa	Predicted RBP	11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	LRP8	Q14114	963 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	ANKRD20A2	Q5SQ80	823 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	ZNF648	Q5T619	568 aa	Predicted RBP	11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	ANKRD20A1	Q5TYW2	823 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	ANKRD20A3	Q5VUR7	823 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	PDPK2P	Q6A1A2	396 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	ITPRIPL1	Q6GPH6	555 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	DARS2	Q6PI48	645 aa	Known RBP	11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	ZNF438	Q7Z4V0	828 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	B3GNT8	Q7Z7M8	397 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	NAGS	Q8N159	534 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	RNF10	Q8N5U6	811 aa	Known RBP	11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	CCDC110	Q8TBZ0	833 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	GRAMD1A	Q96CP6	724 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	SPATA13	Q96N96	652 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	ZSCAN5A	Q9BUG6	496 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	FICD	Q9BVA6	458 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	FSD1L	Q9BXM9	530 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	TSGA10	Q9BZW7	698 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	LRRN3	Q9H3W5	708 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	TRABD	Q9H4I3	376 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	BPIFA1	Q9NP55	256 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	LRIT1	Q9P2V4	623 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	ATXN10	Q9UBB4	475 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	ZNHIT2	Q9UHR6	403 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	TMPRSS11E	Q9UL52	423 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362	ACACA	Q13085	2346 aa		11.65	□□□□□ -0.54
PSMC3-205	ENST00000528362		A0A087WV48	116 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	TCRBV7S2A1N4T	A0A589	114 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	ARHGAP6	O43182	974 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	NUAK1	O60285	661 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	ANXA9	O76027	345 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	DXO	O77932	396 aa	Known RBP	11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	STK10	O94804	968 aa	Known RBP	11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	EML2	O95834	649 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	AGT	P01019	485 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	ACP5	P13686	325 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	PNLIP	P16233	465 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	ZNF8	P17098	575 aa	Predicted RBP	11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	ADRA1A	P35348	466 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	TNNT3	P45378	269 aa	Predicted RBP	11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	LSS	P48449	732 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	B4GALNT1	Q00973	533 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	OLIG2	Q13516	323 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	NR1D2	Q14995	579 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	TBC1D25	Q3MII6	688 aa		11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	KHDC1	Q4VXA5	237 aa	Known RBP	11.64	□□□□□ -0.55
PSMC3-205	ENST00000528362	GLT6D1	Q7Z4J2	308 aa		11.64	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms