RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 ERN2Q76MJ5 926 aaKnown RBP7.03□□□□□ -1.28
CASP4-205ENST00000525116 ABI3BPQ7Z7G0 1075 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 DEFB106AQ8N104 65 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 EXD3Q8N9H8 876 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 ZNF548Q8NEK5 533 aaPredicted RBP7.03□□□□□ -1.28
CASP4-205ENST00000525116 OR2A12Q8NGT7 310 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 PRR11Q96HE9 360 aaPredicted RBP7.03□□□□□ -1.28
CASP4-205ENST00000525116 BMFQ96LC9 184 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 MED15Q96RN5 788 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 TRIM62Q9BVG3 475 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 SLC17A9Q9BYT1 436 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 GTPBP4Q9BZE4 634 aaKnown RBP7.03□□□□□ -1.28
CASP4-205ENST00000525116 THAP9Q9H5L6 903 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 USP29Q9HBJ7 922 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 ACP6Q9NPH0 428 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 C14orf119Q9NWQ9 140 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 ENTPD2Q9Y5L3 495 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 OR51B4Q9Y5P0 310 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 SNX10Q9Y5X0 201 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 HS3ST4Q9Y661 456 aa7.03□□□□□ -1.28
CASP4-205ENST00000525116 UBR5O95071 2799 aaPredicted RBP7.03□□□□□ -1.28
CASP4-205ENST00000525116 FAM237AA0A1B0GTK4 181 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 FAM90A27PA6NNH2 459 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 AQP9O43315 295 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 THAP12O43422 761 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 KDM1AO60341 852 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 ADCY5O95622 1261 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 IGLV3-25P01717 112 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 CSF2P04141 144 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 RHOCP08134 193 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 SLC2A3P11169 496 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 PTX3P26022 381 aaPredicted RBP7.02□□□□□ -1.29
CASP4-205ENST00000525116 CALRP27797 417 aaKnown RBP7.02□□□□□ -1.29
CASP4-205ENST00000525116 CCR1P32246 355 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 USP8P40818 1118 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 RPL34P49207 117 aaKnown RBP7.02□□□□□ -1.29
CASP4-205ENST00000525116 ADKP55263 362 aaKnown RBP7.02□□□□□ -1.29
CASP4-205ENST00000525116 KRT83P78385 493 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 KRT85P78386 507 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 CETN1Q12798 172 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 SGCGQ13326 291 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 BIRC2Q13490 618 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 PDE1CQ14123 709 aaPredicted RBP7.02□□□□□ -1.29
CASP4-205ENST00000525116 FGL2Q14314 439 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 CCDC40Q4G0X9 1142 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 TPRG1LQ5T0D9 272 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 ZNF658Q5TYW1 1059 aaPredicted RBP7.02□□□□□ -1.29
CASP4-205ENST00000525116 ISM2Q6H9L7 571 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 RPTNQ6XPR3 784 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 BEND5Q7L4P6 421 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 TMEM110Q86TL2 294 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 HSCBQ8IWL3 235 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 ARL14Q8N4G2 192 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 TMIEQ8NEW7 156 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 LMO3Q8TAP4 145 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 SNRNP27Q8WVK2 155 aaKnown RBP7.02□□□□□ -1.29
CASP4-205ENST00000525116 CCDC114Q96M63 670 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 PSMB7Q99436 277 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 IL12RB2Q99665 862 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 ZMAT4Q9H898 229 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 UBE2TQ9NPD8 197 aaPredicted RBP7.02□□□□□ -1.29
CASP4-205ENST00000525116 RMND1Q9NWS8 449 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 IL36AQ9UHA7 158 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 IL17BQ9UHF5 180 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 VPS51Q9UID3 782 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 HS3ST3A1Q9Y663 406 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 BSNQ9UPA5 3926 aa7.02□□□□□ -1.29
CASP4-205ENST00000525116 A0A0D9SEW6 157 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 SPTY2D1-AS1A0A0U1RR47 76 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 FAM170AA1A519 330 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 EME2A4GXA9 379 aaPredicted RBP7.01□□□□□ -1.29
CASP4-205ENST00000525116 IGLON5A6NGN9 336 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 BIN1O00499 593 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 FPGTO14772 594 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 MED7O43513 233 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 CLDN11O75508 207 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 GCATO75600 419 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 RECQLP46063 649 aaPredicted RBP7.01□□□□□ -1.29
CASP4-205ENST00000525116 RABIFP47224 123 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 CSRP3P50461 194 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 GP2P55259 537 aaKnown RBP7.01□□□□□ -1.29
CASP4-205ENST00000525116 CDH4P55283 916 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 RPS21P63220 83 aaKnown RBP7.01□□□□□ -1.29
CASP4-205ENST00000525116 PRR5P85299 388 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 SRSF6Q13247 344 aaKnown RBP7.01□□□□□ -1.29
CASP4-205ENST00000525116 PDCLQ13371 301 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 PIN1Q13526 163 aaPredicted RBP7.01□□□□□ -1.29
CASP4-205ENST00000525116 EIF4EBP2Q13542 120 aaPredicted RBP7.01□□□□□ -1.29
CASP4-205ENST00000525116 TGIF1Q15583 401 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 ARL13BQ3SXY8 428 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 LINC00303Q3SY05 128 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 PLEKHN1Q494U1 663 aaPredicted RBP7.01□□□□□ -1.29
CASP4-205ENST00000525116 ALFQ53S48 1182 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 KYAT3Q6YP21 454 aaKnown RBP7.01□□□□□ -1.29
CASP4-205ENST00000525116 DPY19L3Q6ZPD9 716 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 TFAP2DQ7Z6R9 452 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 ATG4DQ86TL0 474 aaPredicted RBP7.01□□□□□ -1.29
CASP4-205ENST00000525116 PARGQ86W56 976 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 IRF2BP1Q8IU81 584 aa7.01□□□□□ -1.29
CASP4-205ENST00000525116 RBFAQ8N0V3 343 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms