RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 LBPP18428 481 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 GRK3P35626 688 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 RPS3AP61247 264 aaKnown RBP6.9□□□□□ -1.3
LIN7C-202ENST00000524596 PMPCAQ10713 525 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 CDNFQ49AH0 187 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 C6orf52Q5T4I8 152 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 MEX3BQ6ZN04 569 aaKnown RBP6.9□□□□□ -1.3
LIN7C-202ENST00000524596 SLC22A16Q86VW1 577 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 FMR1NBQ8N0W7 255 aaPredicted RBP6.9□□□□□ -1.3
LIN7C-202ENST00000524596 MTURNQ8N3F0 131 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 CLRN3Q8NCR9 226 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 TMEM35BQ8NCS4 154 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 C16orf78Q8WTQ4 265 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 TRAPPC12Q8WVT3 735 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 LPGAT1Q92604 370 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 GTF2H4Q92759 462 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 SLC9A7Q96T83 725 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 VAT1Q99536 393 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 HOXD1Q9GZZ0 328 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 TRIT1Q9H3H1 467 aaKnown RBP6.9□□□□□ -1.3
LIN7C-202ENST00000524596 ATXN3LQ9H3M9 355 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 PDGFCQ9NRA1 345 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 SOHLH2Q9NX45 425 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 ANKFY1Q9P2R3 1169 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 MAN2B2Q9Y2E5 1009 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 DMRT1Q9Y5R6 373 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 SOGA1O94964 1423 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 MAP3K1Q13233 1512 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 PPEF2O14830 753 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 KIAA0391O15091 583 aaKnown RBP6.9□□□□□ -1.3
LIN7C-202ENST00000524596 ALDH1A1P00352 501 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 LDLRP01130 860 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 ZNF10P21506 573 aaPredicted RBP6.9□□□□□ -1.3
LIN7C-202ENST00000524596 S100GP29377 79 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 RIDAP52758 137 aaKnown RBP6.9□□□□□ -1.3
LIN7C-202ENST00000524596 ORC2Q13416 577 aaPredicted RBP6.9□□□□□ -1.3
LIN7C-202ENST00000524596 ZBED5Q49AG3 693 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 LRRC38Q5VT99 294 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 LRRC8EQ6NSJ5 796 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 TAF2Q6P1X5 1199 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 COL23A1Q86Y22 540 aaPredicted RBP6.9□□□□□ -1.3
LIN7C-202ENST00000524596 FAM178BQ8IXR5 827 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 BANPQ8N9N5 519 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 ZUFSPQ96AP4 578 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 C12orf43Q96C57 262 aaKnown RBP6.9□□□□□ -1.3
LIN7C-202ENST00000524596 NECAB3Q96P71 396 aaPredicted RBP6.9□□□□□ -1.3
LIN7C-202ENST00000524596 S100A13Q99584 98 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 RBBP8Q99708 897 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 CDC6Q99741 560 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 DPYSL5Q9BPU6 564 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 ZNF408Q9H9D4 720 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 NHEJ1Q9H9Q4 299 aaPredicted RBP6.9□□□□□ -1.3
LIN7C-202ENST00000524596 WDR41Q9HAD4 459 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 MAN2C1Q9NTJ4 1040 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 ZCCHC3Q9NUD5 404 aaKnown RBP6.9□□□□□ -1.3
LIN7C-202ENST00000524596 RAPGEFL1Q9UHV5 662 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 FLVCR2Q9UPI3 526 aa6.9□□□□□ -1.3
LIN7C-202ENST00000524596 C14orf166Q9Y224 244 aaKnown RBP6.9□□□□□ -1.3
LIN7C-202ENST00000524596 APOC3P02656 99 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 ZNF8P17098 575 aaPredicted RBP6.9□□□□□ -1.31
LIN7C-202ENST00000524596 CYP2A7P20853 494 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 FDFT1P37268 417 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 ZNF200P98182 395 aaPredicted RBP6.9□□□□□ -1.31
LIN7C-202ENST00000524596 C2CD6Q53TS8 623 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 ATF7IP2Q5U623 682 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 DARS2Q6PI48 645 aaKnown RBP6.9□□□□□ -1.31
LIN7C-202ENST00000524596 PLET1Q6UQ28 207 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 ZFP82Q8N141 532 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 MARVELD2Q8N4S9 558 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 TMEM104Q8NE00 496 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 SPATA22Q8NHS9 363 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 CEP76Q8TAP6 659 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 RAB2BQ8WUD1 216 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 BSNDQ8WZ55 320 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 TMEM41AQ96HV5 264 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 CCDC17Q96LX7 622 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 C11orf84Q9BUA3 381 aaPredicted RBP6.9□□□□□ -1.31
LIN7C-202ENST00000524596 UNC93B1Q9H1C4 597 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 CXorf21Q9HAI6 301 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 THG1LQ9NWX6 298 aaKnown RBP6.9□□□□□ -1.31
LIN7C-202ENST00000524596 VPS54Q9P1Q0 977 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 CPNE7Q9UBL6 633 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 POLLQ9UGP5 575 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 RBM7Q9Y580 266 aaKnown RBP6.9□□□□□ -1.31
LIN7C-202ENST00000524596 HFM1A2PYH4 1435 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 METTL15A6NJ78 407 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 ZNF701M0R085 212 aaPredicted RBP6.9□□□□□ -1.31
LIN7C-202ENST00000524596 DDX3XO00571 662 aaKnown RBP eCLIP6.9□□□□□ -1.31
LIN7C-202ENST00000524596 PRRG1O14668 218 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 ACOX3O15254 700 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 PPM1DO15297 605 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 ADAMTS2O95450 1211 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 FUCA1P04066 466 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 BMP2P12643 396 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 GNAZP19086 355 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 PTX3P26022 381 aaPredicted RBP6.9□□□□□ -1.31
LIN7C-202ENST00000524596 ACAA2P42765 397 aaKnown RBP6.9□□□□□ -1.31
LIN7C-202ENST00000524596 KCNMA1Q12791 1236 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 TRAF3Q13114 568 aa6.9□□□□□ -1.31
LIN7C-202ENST00000524596 IL18Q14116 193 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms