RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 METTL18O95568 372 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 AK4P27144 223 aaPredicted RBP20.48■□□□□ 0.87
TRIM35-203ENST00000521253 CTBSQ01459 385 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 OASLQ15646 514 aaKnown RBP20.48■□□□□ 0.87
TRIM35-203ENST00000521253 PARP6Q2NL67 630 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 PYCR3Q53H96 274 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 ZNF569Q5MCW4 686 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 PERM1Q5SV97 790 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 OGFOD3Q6PK18 319 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 SFTPA2Q8IWL1 248 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 KLHDC8BQ8IXV7 354 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 MAPK15Q8TD08 544 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 C1orf54Q8WWF1 131 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 NAT6Q93015 286 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 PLEKHG4BQ96PX9 1271 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 OR2M4Q96R27 311 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 FRMD8P1Q9BZ68 369 aaPredicted RBP20.48■□□□□ 0.87
TRIM35-203ENST00000521253 KCNF1Q9H3M0 494 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 DPEP2Q9H4A9 486 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 SPATS2LQ9NUQ6 558 aaKnown RBP20.48■□□□□ 0.87
TRIM35-203ENST00000521253 IL17CQ9P0M4 197 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 PLEKHM1Q9Y4G2 1056 aa20.48■□□□□ 0.87
TRIM35-203ENST00000521253 PCYT1BQ9Y5K3 369 aaPredicted RBP20.48■□□□□ 0.87
TRIM35-203ENST00000521253 KNTC1P50748 2209 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 B4DGG1 531 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 BUD23O43709 281 aaKnown RBP20.47■□□□□ 0.87
TRIM35-203ENST00000521253 DNAJC6O75061 913 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 USP12O75317 370 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 PROS1P07225 676 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 TARDBPQ13148 414 aaKnown RBP eCLIP20.47■□□□□ 0.87
TRIM35-203ENST00000521253 CAMK2BQ13554 666 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 SPARCL1Q14515 664 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 PDPK2PQ6A1A2 396 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 SLC30A9Q6PML9 568 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 GALNT13Q8IUC8 556 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 GPR156Q8NFN8 814 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 RTP4Q96DX8 246 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 TBL1YQ9BQ87 522 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 ABCG4Q9H172 646 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 ARFGAP3Q9NP61 516 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 TAAR2Q9P1P5 351 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 CLCA2Q9UQC9 943 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 PLXNB3Q9ULL4 1909 aa20.47■□□□□ 0.87
TRIM35-203ENST00000521253 BPTFQ12830 3046 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 DMXL2Q8TDJ6 3036 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 NOBOXO60393 691 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 SLC25A14O95258 325 aaPredicted RBP20.46■□□□□ 0.87
TRIM35-203ENST00000521253 MT-CO3P00414 261 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 SIX1Q15475 284 aaPredicted RBP20.46■□□□□ 0.87
TRIM35-203ENST00000521253 ZNF648Q5T619 568 aaPredicted RBP20.46■□□□□ 0.87
TRIM35-203ENST00000521253 CDCP2Q5VXM1 449 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 KCTD11Q693B1 232 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 DENND5AQ6IQ26 1287 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 DCBLD1Q8N8Z6 715 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 GLYATL1Q969I3 302 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 CCDC3Q9BQI4 270 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 IL26Q9NPH9 171 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 ZNHIT2Q9UHR6 403 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 PRKAB1Q9Y478 270 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 ARL5AQ9Y689 179 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 ASXL3Q9C0F0 2248 aa20.46■□□□□ 0.87
TRIM35-203ENST00000521253 USP24Q9UPU5 2620 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 CASC3O15234 703 aaKnown RBP20.45■□□□□ 0.86
TRIM35-203ENST00000521253 STIP1P31948 543 aaKnown RBP20.45■□□□□ 0.86
TRIM35-203ENST00000521253 CXCR5P32302 372 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 MSLNQ13421 630 aaPredicted RBP20.45■□□□□ 0.86
TRIM35-203ENST00000521253 SNX1Q13596 522 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 P3H1Q32P28 736 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 ATP13A5Q4VNC0 1218 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 ZDHHC20Q5W0Z9 365 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 REXO1L1PQ8IX06 675 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 CACTIN-AS1Q8N1I8 211 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 TAB3Q8N5C8 712 aaPredicted RBP20.45■□□□□ 0.86
TRIM35-203ENST00000521253 ANP32BQ92688 251 aaKnown RBP20.45■□□□□ 0.86
TRIM35-203ENST00000521253 CCDC74AQ96AQ1 378 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 OR2AG1Q9H205 316 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 RMI1Q9H9A7 625 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 ATXN10Q9UBB4 475 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 RABGEF1Q9UJ41 708 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 TMPRSS11EQ9UL52 423 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 ZNF148Q9UQR1 794 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 PKP3Q9Y446 797 aa20.45■□□□□ 0.86
TRIM35-203ENST00000521253 ZZEF1O43149 2961 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 TRABD2BA6NFA1 517 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 NUAK1O60285 661 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 PPFIA2O75334 1257 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 FGGP02679 453 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 ZNF8P17098 575 aaPredicted RBP20.44■□□□□ 0.86
TRIM35-203ENST00000521253 SPAM1P38567 509 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 ACTR1BP42025 376 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 ACTR1AP61163 376 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 LRP8Q14114 963 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 HLTFQ14527 1009 aaKnown RBP eCLIP20.44■□□□□ 0.86
TRIM35-203ENST00000521253 PTPRCAPQ14761 206 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 TAF1AQ15573 450 aaPredicted RBP20.44■□□□□ 0.86
TRIM35-203ENST00000521253 C14orf28Q4W4Y0 310 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 CERCAMQ5T4B2 595 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 FAM151BQ6UXP7 276 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 ADGRG6Q86SQ4 1221 aa20.44■□□□□ 0.86
TRIM35-203ENST00000521253 PHYKPLQ8IUZ5 450 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms