RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ZDHHC12Q96GR4 267 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 HSH2DQ96JZ2 352 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 FAM71F1Q96KD3 344 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SLC6A18Q96N87 628 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TRAPPC9Q96Q05 1148 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ANO3Q9BYT9 981 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZMYND12Q9H0C1 365 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TMEM8AQ9HCN3 771 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SLC39A2Q9NP94 309 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TUBG2Q9NRH3 451 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TMPRSS4Q9NRS4 437 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 NDUFAF4Q9P032 175 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SLC9A8Q9Y2E8 581 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 AP4B1Q9Y6B7 739 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SZT2Q5T011 3432 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNFX1Q9P2E3 1918 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SYNGAP1Q96PV0 1343 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 MYADML2A6NDP7 307 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 FAM86B1E9PN63 330 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 H0Y8G0 127 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TGFBR3LH3BV60 316 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 CTDSP2O14595 271 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 PCDH17O14917 1159 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SEPT4O43236 478 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 LRRTM2O43300 516 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SCGB2A1O75556 95 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SMNDC1O75940 238 aaKnown RBP eCLIP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SERPINF2P08697 491 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 AKR1A1P14550 325 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 CPB1P15086 417 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SMPD1P17405 629 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 CCND2P30279 289 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 FASLGP48023 281 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 NRIP1P48552 1158 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 GPX6P59796 221 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 MRPS9P82933 396 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 GOLGA8FQ08AF8 430 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 GOLGA8DPQ0D2H9 430 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 LARS2Q15031 903 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SF3B4Q15427 424 aaKnown RBP eCLIP5.02□□□□□ -1.612e-7■■■■■ 32.9
TRAPPC11-208ENST00000511955 TAZQ16635 292 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SYT16Q17RD7 645 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 BCL7AQ4VC05 210 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 EARS2Q5JPH6 523 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TJAP1Q5JTD0 557 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 LCN1P1Q5VSP4 162 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 DAB2IPQ5VWQ8 1189 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 C18orf63Q68DL7 685 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 HEPHL1Q6MZM0 1159 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 FSTL4Q6MZW2 842 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 NEPROQ6NW34 567 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ARMC6Q6NXE6 501 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 METTL2BQ6P1Q9 378 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 CCNJLQ8IV13 435 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 GPR65Q8IYL9 337 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ASCC1Q8N9N2 400 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 DNERQ8NFT8 737 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 BAHD1Q8TBE0 780 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TBCKQ8TEA7 893 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 LZICQ8WZA0 190 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SEC14L1Q92503 715 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 DPF1Q92782 380 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TANKQ92844 425 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 RAB24Q969Q5 203 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ZNF707Q96C28 371 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 MYRFLQ96LU7 910 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ANKRD27Q96NW4 1050 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 KCTD15Q96SI1 283 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 EFHD1Q9BUP0 239 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 PRR14Q9BWN1 585 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 KLHL25Q9H0H3 589 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 PCDH9Q9HC56 1237 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 NEK6Q9HC98 313 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TM7SF3Q9NS93 570 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 MRPL39Q9NYK5 338 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 IL20RAQ9UHF4 553 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 DNAI1Q9UI46 699 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 KCND3Q9UK17 655 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 PCDHA4Q9UN74 947 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SOX13Q9UN79 622 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ERVK-11Q9UQG0 969 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 HRH3Q9Y5N1 445 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 BZW2Q9Y6E2 419 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 CDH23Q9H251 3354 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 PLXNA1Q9UIW2 1896 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TRBV23OR9-2A0A075B6M9 112 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 MEI4A8MW99 385 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 H3BQF6 201 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 PSMD11O00231 422 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 SLC16A3O15427 465 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 CHMP2AO43633 222 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 AKAP3O75969 853 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 TDP2O95551 362 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 DDAH2O95865 285 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 CHEK2O96017 543 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 PRLP01236 227 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 IFNA14P01570 189 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 CSF2P04141 144 aa5.01□□□□□ -1.61
TRAPPC11-208ENST00000511955 FAM86B2P0C5J1 330 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms