RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 PSMG1O95456 288 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 MT-CO1P00395 513 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 HNRNPLP14866 589 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 NFKBIAP25963 317 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 CCR10P46092 362 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 CUL3Q13618 768 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 E2F5Q15329 346 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 ACSBG2Q5FVE4 666 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 PGM2L1Q6PCE3 622 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 LYSMD3Q7Z3D4 306 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 PIANPQ8IYJ0 282 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 LENG8Q96PV6 779 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 CCT7Q99832 543 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 TM6SF2Q9BZW4 377 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 MRPL40Q9NQ50 206 aaKnown RBP17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 SLC7A8Q9UHI5 535 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 EVLQ9UI08 416 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 L3MBTL1Q9Y468 752 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 A0A088AWK7 358 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 TRBV5-4A0A0C4DH59 114 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 C5orf67F2Z3F1 127 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 SLC9A3R1O14745 358 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 CCL16O15467 120 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 MLYCDO95822 493 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 RB1P06400 928 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 MTHFD2P13995 350 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 OR4D1Q15615 310 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 CCDC6Q16204 474 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 KHDC1Q4VXA5 237 aaKnown RBP17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 CMPK2Q5EBM0 449 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 CTSL3PQ5NE16 218 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 ANKS6Q68DC2 871 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 TPGS1Q6ZTW0 290 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 USP45Q70EL2 814 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 TAS2R42Q7RTR8 314 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 CAMK1DQ8IU85 385 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 RYBPQ8N488 228 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 PAF1Q8N7H5 531 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 KYQ8NBH2 561 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 NUSAP1Q9BXS6 441 aaKnown RBP17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 KLHL42Q9P2K6 505 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 FAM50BQ9Y247 325 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 DHRS7Q9Y394 339 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 SLC4A7Q9Y6M7 1214 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 ZNF197O14709 1029 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 TLL1O43897 1013 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 ITGAXP20702 1163 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 CD70P32970 193 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 VASPP50552 380 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 LCP2Q13094 533 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 SETMARQ53H47 684 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 TMEM240Q5SV17 173 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 C1orf146Q5VVC0 180 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 C22orf39Q6P5X5 142 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 POU5F2Q8N7G0 328 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 CD200R1Q8TD46 325 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 ECHDC3Q96DC8 303 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 CLPBQ9H078 707 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 EFCAB1Q9HAE3 211 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 TDP1Q9NUW8 608 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 UTP6Q9NYH9 597 aaKnown RBP17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 NUDT4Q9NZJ9 180 aa17.16■□□□□ 0.34
TRAPPC11-204ENST00000505676 SUPT3HB4E1H0 165 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 SUPT3HO75486 399 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 POP4O95707 220 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 RPS17P08708 135 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 SRCP12931 536 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 SPAM1P38567 509 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 RGS4P49798 205 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 ERVFC1P60507 584 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 AP2B1P63010 937 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 SLC34A1Q06495 639 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 STX5Q13190 355 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 MYLK3Q32MK0 819 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 PLPP4Q5VZY2 271 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 ADAMTSL2Q86TH1 951 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 FBXO27Q8NI29 283 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 ZDHHC7Q9NXF8 308 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 MARK1Q9P0L2 795 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 C1orf232A0A0U1RR37 186 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 K7ERQ8 282 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 UBXN8O00124 270 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 UBDO15205 165 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 SMAD6O43541 496 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 GPC4O75487 556 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 CHRM3P20309 590 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 KCNC1P48547 511 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 ACADVLP49748 655 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 SLC25A3Q00325 362 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 PFKFB4Q16877 469 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 RIPOR1Q6ZS17 1223 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 TPRG1Q6ZUI0 275 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 PGAM4Q8N0Y7 254 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 SPPL3Q8TCT6 385 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 POF1BQ8WVV4 589 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 GBF1Q92538 1859 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 FUBP1Q96AE4 644 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 CDH22Q9UJ99 828 aa17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 INTS6Q9UL03 887 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms