RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ZNF175Q9Y473 711 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 KCNE2Q9Y6J6 123 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 A0A1B0GVM2 712 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 USP17L15C9J2P7 530 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 USP17L10C9JJH3 530 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 USP17L13C9JLJ4 530 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 USP17L11C9JVI0 530 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 USP17L18D6R9N7 530 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 USP17L22D6RA61 530 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 USP17L17D6RBQ6 530 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 USP17L19D6RCP7 530 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 USP17L20D6RJB6 530 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 DDHD2O94830 711 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 IFNA16P05015 189 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 S100A6P06703 90 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 ARNTP27540 789 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 OXTRP30559 389 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 HTR7P34969 479 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 GRIA4P48058 902 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 RFX2P48378 723 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 TKTL1P51854 596 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 SLC7A2P52569 658 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 FCGRTP55899 365 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 GTF2IP78347 998 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 GBE1Q04446 702 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 USP17L24Q0WX57 530 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 SNTA1Q13424 505 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 EFR3AQ14156 821 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 ACAP2Q15057 778 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 WDR44Q5JSH3 913 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 LRRC8EQ6NSJ5 796 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 USP17L6PQ6QN14 398 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 TBPL2Q6SJ96 375 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 PADI6Q6TGC4 694 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 ZNF517Q6ZMY9 492 aaPredicted RBP4.78□□□□□ -1.64
PRKD3-210ENST00000494667 LARP4Q71RC2 724 aaKnown RBP eCLIP4.78□□□□□ -1.64
PRKD3-210ENST00000494667 TMEM135Q86UB9 458 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 LDHDQ86WU2 507 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 RAB43Q86YS6 212 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 SNX29P2Q8IUI4 249 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 FUNDC1Q8IVP5 155 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 NLGN4XQ8N0W4 816 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 C3orf58Q8NDZ4 430 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 GMCL1P1Q8NEA9 526 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 PSMA8Q8TAA3 256 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 SLC38A4Q969I6 547 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 RNF34Q969K3 372 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 TMEM125Q96AQ2 219 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 GPR78Q96P69 363 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 SLC4A9Q96Q91 983 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 TRMOQ9BU70 441 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 ACE2Q9BYF1 805 aaPredicted RBP4.78□□□□□ -1.64
PRKD3-210ENST00000494667 EHMT1Q9H9B1 1298 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 VAT1LQ9HCJ6 419 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 WASH6PQ9NQA3 447 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 NDFIP2Q9NV92 336 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 CMTM6Q9NX76 183 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 TMOD3Q9NYL9 352 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 GOLGA8JA6NMD2 632 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 FGF18O76093 207 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 HLA-DQB1P01920 261 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 CHRNGP07510 517 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 SLC6A2P23975 617 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 PXNP49023 591 aaPredicted RBP4.78□□□□□ -1.64
PRKD3-210ENST00000494667 MAPKAPK2P49137 400 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 CD47Q08722 323 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 RALGDSQ12967 914 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 DGKZQ13574 1117 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 CLCA4Q14CN2 919 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 FCRLBQ6BAA4 426 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 TTBK2Q6IQ55 1244 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 PIGZQ86VD9 579 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 RFX6Q8HWS3 928 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 CCDC103Q8IW40 242 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 CNTN4Q8IWV2 1026 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 KIAA0319LQ8IZA0 1049 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 RBFAQ8N0V3 343 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 PLD6Q8N2A8 252 aaKnown RBP4.78□□□□□ -1.64
PRKD3-210ENST00000494667 MPP5Q8N3R9 675 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 PQLC3Q8N755 202 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 RNF148Q8N7C7 305 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 FAM110BQ8TC76 370 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 SGCDQ92629 289 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 RORBQ92753 470 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 KIAA1143Q96AT1 154 aaPredicted RBP4.78□□□□□ -1.64
PRKD3-210ENST00000494667 GMCL1Q96IK5 515 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 CDADC1Q9BWV3 514 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 AMNQ9BXJ7 453 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 PPA2Q9H2U2 334 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 TMEM245Q9H330 911 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 APOBEC3GQ9HC16 384 aaKnown RBP4.78□□□□□ -1.64
PRKD3-210ENST00000494667 ANKEF1Q9NU02 776 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 TOR4AQ9NXH8 423 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 BFARQ9NZS9 450 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 NYAP2Q9P242 653 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 HECAQ9UBI9 543 aaPredicted RBP4.78□□□□□ -1.64
PRKD3-210ENST00000494667 PCDHB3Q9Y5E6 796 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 PCDHA1Q9Y5I3 950 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 LYVE1Q9Y5Y7 322 aa4.78□□□□□ -1.64
PRKD3-210ENST00000494667 COL2A1P02458 1487 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms