RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 OTUB2Q96DC9 234 aa10.02□□□□□ -0.81
PRPF3-206ENST00000493553 PRICKLE1Q96MT3 831 aaPredicted RBP10.02□□□□□ -0.81
PRPF3-206ENST00000493553 RILPQ96NA2 401 aa10.02□□□□□ -0.81
PRPF3-206ENST00000493553 CORO1BQ9BR76 489 aa10.02□□□□□ -0.81
PRPF3-206ENST00000493553 FEM1AQ9BSK4 669 aa10.02□□□□□ -0.81
PRPF3-206ENST00000493553 TDRD1Q9BXT4 1180 aaKnown RBP10.02□□□□□ -0.81
PRPF3-206ENST00000493553 RNF38Q9H0F5 515 aa10.02□□□□□ -0.81
PRPF3-206ENST00000493553 MMADHCQ9H3L0 296 aaPredicted RBP10.02□□□□□ -0.81
PRPF3-206ENST00000493553 NOD2Q9HC29 1040 aa10.02□□□□□ -0.81
PRPF3-206ENST00000493553 GKN1Q9NS71 199 aa10.02□□□□□ -0.81
PRPF3-206ENST00000493553 CATSPERZQ9NTU4 200 aa10.02□□□□□ -0.81
PRPF3-206ENST00000493553 HAO1Q9UJM8 370 aa10.02□□□□□ -0.81
PRPF3-206ENST00000493553 ARHGAP26Q9UNA1 814 aa10.02□□□□□ -0.81
PRPF3-206ENST00000493553 RUVBL2Q9Y230 463 aaKnown RBP10.02□□□□□ -0.81
PRPF3-206ENST00000493553 RAP2CQ9Y3L5 183 aa10.02□□□□□ -0.81
PRPF3-206ENST00000493553 CPQQ9Y646 472 aa10.02□□□□□ -0.81
PRPF3-206ENST00000493553 SLC4A7Q9Y6M7 1214 aa10.02□□□□□ -0.81
PRPF3-206ENST00000493553 GREB1Q4ZG55 1949 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 LTBP2Q14767 1821 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 A0A0D9SEW6 157 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 C2orf78A6NCI8 922 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 TRPC5OSA6NMA1 111 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 ANKRD65E5RJM6 399 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 ZNF197O14709 1029 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 NDUFS3O75489 264 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 ZMPSTE24O75844 475 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 TMCC1O94876 653 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 GSRP00390 522 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 C8AP07357 584 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 CTSBP07858 339 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 IRF1P10914 325 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 PTPN2P17706 415 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 PRDX6P30041 224 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 CA8P35219 290 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 SCNN1BP51168 640 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 EPHA5P54756 1037 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 EPHB1P54762 984 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 TAS2R39P59534 338 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 ATP6V0D1P61421 351 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 GALNT1Q10472 559 aaPredicted RBP10.01□□□□□ -0.81
PRPF3-206ENST00000493553 OVGP1Q12889 678 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 CTBP1Q13363 440 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 RCN2Q14257 317 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 CYTH1Q15438 398 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 SNCBQ16143 134 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 TYSND1Q2T9J0 566 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 PPM1JQ5JR12 505 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 LYPLAL1Q5VWZ2 237 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 ZDHHC20Q5W0Z9 365 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 CXorf57Q6NSI4 855 aaKnown RBP10.01□□□□□ -0.81
PRPF3-206ENST00000493553 UGT3A1Q6NUS8 523 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 CYB5D1Q6P9G0 228 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 KDELC2Q7Z4H8 507 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 GLT6D1Q7Z4J2 308 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 TMEM150AQ86TG1 271 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 SUGP1Q8IWZ8 645 aaKnown RBP10.01□□□□□ -0.81
PRPF3-206ENST00000493553 CARNMT1Q8N4J0 409 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 MRPL43Q8N983 215 aaKnown RBP10.01□□□□□ -0.81
PRPF3-206ENST00000493553 OR13J1Q8NGT2 312 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 HERVK_113Q902F9 699 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 ISG20Q96AZ6 181 aaKnown RBP10.01□□□□□ -0.81
PRPF3-206ENST00000493553 CNDP1Q96KN2 507 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 ZNF778Q96MU6 729 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 TUBGCP5Q96RT8 1024 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 OMDQ99983 421 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 MECRQ9BV79 373 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 SLC2A11Q9BYW1 496 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 DRC3Q9H069 523 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 C12orf65Q9H3J6 166 aaKnown RBP10.01□□□□□ -0.81
PRPF3-206ENST00000493553 ATXN3LQ9H3M9 355 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 KCNK13Q9HB14 408 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 MAGEE1Q9HCI5 957 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 PFDN4Q9NQP4 134 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 SLC17A6Q9P2U8 582 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 DNMT3BQ9UBC3 853 aaKnown RBP10.01□□□□□ -0.81
PRPF3-206ENST00000493553 DNAJC16Q9Y2G8 782 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 PKP3Q9Y446 797 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 RAI2Q9Y5P3 530 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 SHROOM3Q8TF72 1996 aa10.01□□□□□ -0.81
PRPF3-206ENST00000493553 KIAA0100Q14667 2235 aaKnown RBP10.01□□□□□ -0.81
PRPF3-206ENST00000493553 SCN5AQ14524 2016 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 COL4A6Q14031 1691 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 CCDC195A0A1B0GUA6 201 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 ANKRD66B4E2M5 251 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 G3V2L1 256 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 H3BMM5 538 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 H7C0S8 307 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 FCHO1O14526 889 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 STX7O15400 261 aaKnown RBP10□□□□□ -0.81
PRPF3-206ENST00000493553 MGRN1O60291 552 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 TSPAN3O60637 253 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 SMIM24O75264 130 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 IGSF6O95976 241 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 LMNAP02545 664 aaKnown RBP10□□□□□ -0.81
PRPF3-206ENST00000493553 ADH5P11766 374 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 DRD2P14416 443 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 TCF3P15923 654 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 GABRB3P28472 473 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 AVPR1AP37288 418 aa10□□□□□ -0.81
PRPF3-206ENST00000493553 CLCN4P51793 760 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms