RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 KLHL3Q9UH77 587 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 ZNHIT2Q9UHR6 403 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 KCND3Q9UK17 655 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 CROTQ9UKG9 612 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 DNPEPQ9ULA0 475 aa17.51■□□□□ 0.39
NUP50-218ENST00000493456 ITPR2Q14571 2701 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 A6NCN8 305 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 LILRA5A6NI73 299 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 OR5K4A6NMS3 321 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 INPP4BO15327 924 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 DNAJC6O75061 913 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 ASMTLO95671 621 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 ATP1A3P13637 1013 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 CTPS1P17812 591 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 TNFAIP3P21580 790 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 PMS2P54278 862 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 MAXP61244 160 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 PTSQ03393 145 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 CDKAL1Q5VV42 579 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 CAPRIN2Q6IMN6 1127 aaKnown RBP17.5■□□□□ 0.39
NUP50-218ENST00000493456 RFLNAQ6ZTI6 216 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 CYP4V2Q6ZWL3 525 aaPredicted RBP17.5■□□□□ 0.39
NUP50-218ENST00000493456 CHST15Q7LFX5 561 aaPredicted RBP17.5■□□□□ 0.39
NUP50-218ENST00000493456 ATPAF2Q8N5M1 289 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 ARFGAP1Q8N6T3 406 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 EFCAB3Q8N7B9 438 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 RMI1Q9H9A7 625 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 CENPEQ02224 2701 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 ICE1Q9Y2F5 2266 aa17.5■□□□□ 0.39
NUP50-218ENST00000493456 CRYBG3Q68DQ2 2970 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 H3BRJ5 948 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 K7EM74 188 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 TOX3O15405 576 aaPredicted RBP17.49■□□□□ 0.39
NUP50-218ENST00000493456 MAFKO60675 156 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 RECKO95980 971 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 CCDC172P0C7W6 258 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 F3P13726 295 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 MIPP30301 263 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 MMP13P45452 471 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 UQCRFS1P47985 274 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 CDH6P55285 790 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 FOXM1Q08050 763 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 ERV3-1Q14264 604 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 PTPRRQ15256 657 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 MARC1Q5VT66 337 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 PLEKHA7Q6IQ23 1121 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 TMCO3Q6UWJ1 677 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 LYSMD3Q7Z3D4 306 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 ENOX1Q8TC92 643 aaKnown RBP17.49■□□□□ 0.39
NUP50-218ENST00000493456 STAMBPL1Q96FJ0 436 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 PCMTD1Q96MG8 357 aaPredicted RBP17.49■□□□□ 0.39
NUP50-218ENST00000493456 AGAP2Q99490 1192 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 UCK1Q9HA47 277 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 CPNE7Q9UBL6 633 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 PCDHGA6Q9Y5G7 932 aa17.49■□□□□ 0.39
NUP50-218ENST00000493456 CELSR2Q9HCU4 2923 aa17.48■□□□□ 0.39
NUP50-218ENST00000493456 A0A0J9YYE9 177 aa17.48■□□□□ 0.39
NUP50-218ENST00000493456 FZD6O60353 706 aa17.48■□□□□ 0.39
NUP50-218ENST00000493456 TRBC1P01850 177 aa17.48■□□□□ 0.39
NUP50-218ENST00000493456 C9P02748 559 aa17.48■□□□□ 0.39
NUP50-218ENST00000493456 ARL4AP40617 200 aa17.48■□□□□ 0.39
NUP50-218ENST00000493456 STC1P52823 247 aa17.48■□□□□ 0.39
NUP50-218ENST00000493456 IL11RAQ14626 422 aa17.48■□□□□ 0.39
NUP50-218ENST00000493456 APLFQ8IW19 511 aaPredicted RBP17.48■□□□□ 0.39
NUP50-218ENST00000493456 SSC4DQ8WTU2 575 aa17.48■□□□□ 0.39
NUP50-218ENST00000493456 C9orf72Q96LT7 481 aa17.48■□□□□ 0.39
NUP50-218ENST00000493456 RIOK2Q9BVS4 552 aaKnown RBP17.48■□□□□ 0.39
NUP50-218ENST00000493456 TBC1D10AQ9BXI6 508 aa17.48■□□□□ 0.39
NUP50-218ENST00000493456 TLK1Q9UKI8 766 aa17.48■□□□□ 0.39
NUP50-218ENST00000493456 KCNK6Q9Y257 313 aa17.48■□□□□ 0.39
NUP50-218ENST00000493456 PCYT1BQ9Y5K3 369 aaPredicted RBP17.48■□□□□ 0.39
NUP50-218ENST00000493456 A0A0U1RQS6 177 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 GOLGA6L3A6NEY3 463 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 TMEM191CA6NGB0 347 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 ENO4A6NNW6 628 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 TTLL8A6PVC2 850 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 KATNA1O75449 491 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 NDUFA10O95299 355 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 PDHA1P08559 390 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 FURINP09958 794 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 ACP5P13686 325 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 ZNF28P17035 718 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 GNLYP22749 145 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 SERPINB6P35237 376 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 EPHB1P54762 984 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 GFERP55789 205 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 DPYSL2Q16555 572 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 HIST2H2BCQ6DN03 193 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 PHYKPLQ8IUZ5 450 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 GALNT6Q8NCL4 622 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 CPT1CQ8TCG5 803 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 ZNF768Q9H5H4 540 aaKnown RBP17.47■□□□□ 0.39
NUP50-218ENST00000493456 CUEDC1Q9NWM3 386 aaPredicted RBP17.47■□□□□ 0.39
NUP50-218ENST00000493456 TAS2R14Q9NYV8 317 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 PRKAB1Q9Y478 270 aa17.47■□□□□ 0.39
NUP50-218ENST00000493456 OAS3Q9Y6K5 1087 aaKnown RBP17.47■□□□□ 0.39
NUP50-218ENST00000493456 LRBAP50851 2863 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 RP1L1Q8IWN7 2480 aaPredicted RBP17.46■□□□□ 0.39
NUP50-218ENST00000493456 CDC14CA4D256 554 aa17.46■□□□□ 0.39
NUP50-218ENST00000493456 ATMINO43313 823 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms