RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 NR2C2P49116 596 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 NIPAL4Q0D2K0 466 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 AP1B1Q10567 949 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 SLC10A2Q12908 348 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-205ENST00000492851 PTPRRQ15256 657 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 SLC14A2Q15849 920 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 QPCTQ16769 361 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 HENMT1Q5T8I9 393 aaKnown RBP12.36□□□□□ -0.43
COL6A1-205ENST00000492851 PDPK2PQ6A1A2 396 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 SLC9A4Q6AI14 798 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 WDR74Q6RFH5 385 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-205ENST00000492851 RFLNAQ6ZTI6 216 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 MARK2Q7KZI7 788 aaKnown RBP12.36□□□□□ -0.43
COL6A1-205ENST00000492851 CHST15Q7LFX5 561 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-205ENST00000492851 SLC9B2Q86UD5 537 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 NT5DC3Q86UY8 548 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 RHOT1Q8IXI2 618 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 SFRP1Q8N474 314 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 HERPUD2Q9BSE4 406 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 ZSCAN5AQ9BUG6 496 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 CARD9Q9H257 536 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 EPB41L1Q9H4G0 881 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 NHEJ1Q9H9Q4 299 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-205ENST00000492851 SARS2Q9NP81 518 aaKnown RBP12.36□□□□□ -0.43
COL6A1-205ENST00000492851 ABHD10Q9NUJ1 306 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 LRRK1Q38SD2 2015 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 LRP4O75096 1905 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 KIR2DS5A0A0G2JLQ3 304 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 A0A0G2JNG1 304 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 B4E171 279 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 C9orf172C9J069 976 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 KIR2DS3K7RE56 304 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 KCNK1O00180 336 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 EFSO43281 561 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 DUX1O43812 170 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 DNAJC6O75061 913 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 TSPAN7P41732 249 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 TNNT3P45378 269 aaPredicted RBP12.35□□□□□ -0.43
COL6A1-205ENST00000492851 PPM1FP49593 454 aaPredicted RBP12.35□□□□□ -0.43
COL6A1-205ENST00000492851 ATP1A2P50993 1020 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 RAB15P59190 212 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 TFDP2Q14188 446 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 KIR2DS5Q14953 304 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 C16orf72Q14CZ0 275 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 TCEAL1Q15170 157 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 IYDQ6PHW0 289 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 ZNF574Q6ZN55 896 aaPredicted RBP12.35□□□□□ -0.43
COL6A1-205ENST00000492851 LYSMD3Q7Z3D4 306 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 DTX1Q86Y01 620 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 PHYKPLQ8IUZ5 450 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 CNGA4Q8IV77 575 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 IMP4Q96G21 291 aaKnown RBP12.35□□□□□ -0.43
COL6A1-205ENST00000492851 CCDC74BQ96LY2 380 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 TEFMQ96QE5 360 aaKnown RBP12.35□□□□□ -0.43
COL6A1-205ENST00000492851 AGAP2Q99490 1192 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 NUDT22Q9BRQ3 303 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 ARHGAP9Q9BRR9 750 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 DDA1Q9BW61 102 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 PACSIN1Q9BY11 444 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 SLC25A51Q9H1U9 297 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 TRIM39Q9HCM9 518 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 PDP2Q9P2J9 529 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 CNOT6Q9ULM6 557 aaKnown RBP12.35□□□□□ -0.43
COL6A1-205ENST00000492851 ST14Q9Y5Y6 855 aa12.35□□□□□ -0.43
COL6A1-205ENST00000492851 B8ZZF3 427 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 MTSS1O43312 755 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 GRID2O43424 1007 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 NUAK1O60285 661 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 SLC25A14O95258 325 aaPredicted RBP12.34□□□□□ -0.43
COL6A1-205ENST00000492851 MMP2P08253 660 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 THRAP10827 490 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 F3P13726 295 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 CLCNKAP51800 687 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 EPHA4P54764 986 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 DCDC1P59894 354 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 HHEXQ03014 270 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 CDK18Q07002 472 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 IHHQ14623 411 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 TGIF1Q15583 401 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.34□□□□□ -0.43
COL6A1-205ENST00000492851 DCAF12Q5T6F0 453 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 KIAA1614Q5VZ46 1190 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 ZDHHC20Q5W0Z9 365 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 TMPRSS9Q7Z410 1059 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 TMC3Q7Z5M5 1100 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 TRIM74Q86UV6 250 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 ZFAND4Q86XD8 727 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 VSTM4Q8IW00 320 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 PLD5Q8N7P1 536 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 CNTD1Q8N815 330 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 SLC37A2Q8TED4 501 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 PTCD2Q8WV60 388 aaKnown RBP12.34□□□□□ -0.43
COL6A1-205ENST00000492851 PATE1Q8WXA2 126 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 ZPBPQ9BS86 351 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 ZMYND15Q9H091 742 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.34□□□□□ -0.43
COL6A1-205ENST00000492851 NFKBIL1Q9UBC1 381 aaPredicted RBP12.34□□□□□ -0.43
COL6A1-205ENST00000492851 PLEKHM1Q9Y4G2 1056 aa12.34□□□□□ -0.43
COL6A1-205ENST00000492851 ANKRD36A6QL64 1941 aa12.33□□□□□ -0.44
COL6A1-205ENST00000492851 SHROOM3Q8TF72 1996 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms