RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 SLC1A5Q15758 541 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 C14orf28Q4W4Y0 310 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 ANKRD20A2Q5SQ80 823 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 ANKRD20A1Q5TYW2 823 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 ANKRD20A3Q5VUR7 823 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 DOK6Q6PKX4 331 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 ZNF662Q6ZS27 426 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 OR6C4Q8NGE1 309 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 SLC35B2Q8TB61 432 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 DTX3LQ8TDB6 740 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 UBE2Q2Q8WVN8 375 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 CCDC74AQ96AQ1 378 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 GSDMCQ9BYG8 508 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 GBA3Q9H227 469 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 GOLGA6AQ9NYA3 693 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 IL17CQ9P0M4 197 aa13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 R3HDM2Q9Y2K5 976 aaKnown RBP13.96□□□□□ -0.17
RTFDC1-204ENST00000449062 NBEAQ8NFP9 2946 aa13.96□□□□□ -0.18
RTFDC1-204ENST00000449062 C5orf60A6NFR6 353 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 F5H423 210 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 B4GAT1O43505 415 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 NUDT21O43809 227 aaKnown RBP13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 CSO75390 466 aaKnown RBP13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 AGTP01019 485 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 GLB1P16278 677 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 CETN2P41208 172 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 LSSP48449 732 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 CCL7P80098 99 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 B4GALNT1Q00973 533 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 ILF3Q12906 894 aaKnown RBP eCLIP13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 DENND5AQ6IQ26 1287 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 CCDC70Q6NSX1 233 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 ZNF438Q7Z4V0 828 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 LRRC8AQ8IWT6 810 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 NAGSQ8N159 534 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 TRAM1L1Q8N609 369 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 UBL4BQ8N7F7 174 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 WDR48Q8TAF3 677 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 GRAMD1AQ96CP6 724 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 PRR11Q96HE9 360 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 DEPDC7Q96QD5 511 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 GPR63Q9BZJ6 419 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 DPEP2Q9H4A9 486 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 TRABDQ9H4I3 376 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 IL26Q9NPH9 171 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 RAD18Q9NS91 495 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 RAXQ9Y2V3 346 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 ENTPD2Q9Y5L3 495 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 RNF215Q9Y6U7 377 aa13.95□□□□□ -0.18
RTFDC1-204ENST00000449062 KIF26BQ2KJY2 2108 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 PRR19A6NJB7 356 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 GAPDHSO14556 408 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 CHUKO15111 745 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 TLX3O43711 291 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 NUAK1O60285 661 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 DXOO77932 396 aaKnown RBP13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 EML2O95834 649 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 HLA-DPA1P20036 260 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 CA5AP35218 305 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 LRP8Q14114 963 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 NR1D2Q14995 579 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 CCDC181Q5TID7 509 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 PDPK2PQ6A1A2 396 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 DARS2Q6PI48 645 aaKnown RBP13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 RBM44Q6ZP01 1051 aaKnown RBP13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 MARK2Q7KZI7 788 aaKnown RBP13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 CDKL3Q8IVW4 592 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 ARL14Q8N4G2 192 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 SLC25A41Q8N5S1 370 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 IPMKQ8NFU5 416 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 CCDC110Q8TBZ0 833 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 PATE1Q8WXA2 126 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 NXPE2Q96DL1 559 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 SPATA13Q96N96 652 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 PLEKHG4BQ96PX9 1271 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 OR2M4Q96R27 311 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 ZSCAN5AQ9BUG6 496 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 SPATA16Q9BXB7 569 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 LRRN3Q9H3W5 708 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 SUDS3Q9H7L9 328 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 RMI1Q9H9A7 625 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 ARNT2Q9HBZ2 717 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 TRIM39Q9HCM9 518 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 LRIT1Q9P2V4 623 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 ATXN10Q9UBB4 475 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 RSPH14Q9UHP6 348 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 GUCA1BQ9UMX6 200 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 PRKAB1Q9Y478 270 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 GPSM3Q9Y4H4 160 aa13.94□□□□□ -0.18
RTFDC1-204ENST00000449062 A0A087WV48 116 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 A6NCN8 305 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 B4DGG1 531 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 PPM1DO15297 605 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 KCNN4O15554 427 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 USP12O75317 370 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 ANXA9O76027 345 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 ASMTLO95671 621 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 ECEL1O95672 775 aa13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 ZNF8P17098 575 aaPredicted RBP13.93□□□□□ -0.18
RTFDC1-204ENST00000449062 GEMP55040 296 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms