RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SMYD1Q8NB12 490 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 KIAA1191Q96A73 305 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 CNDP2Q96KP4 475 aaKnown RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 COG8Q96MW5 612 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 KCTD14Q9BQ13 255 aaPredicted RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 AARSD1Q9BTE6 412 aaKnown RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 AIG1Q9NVV5 245 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 NUDT5Q9UKK9 219 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 ZNF510Q9Y2H8 683 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 PCNTO95613 3336 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 ASPDHA6ND91 283 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 MAGEB3O15480 346 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 CYBBP04839 570 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 MTHFD1P11586 935 aaKnown RBP18.99■□□□□ 0.63
SDCBP-204ENST00000447182 PAX3P23760 479 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 SCNN1BP51168 640 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 DIO3P55073 304 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 KCNK10P57789 538 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 TSPY1Q01534 308 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 LIPEQ05469 1076 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 BTG3Q14201 252 aaPredicted RBP18.99■□□□□ 0.63
SDCBP-204ENST00000447182 RAB39AQ14964 217 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 OVOS1Q6IE37 1185 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 THEM5Q8N1Q8 247 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 LEMD2Q8NC56 503 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 STAG3L4Q8TBR4 150 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 PNPT1Q8TCS8 783 aaKnown RBP18.99■□□□□ 0.63
SDCBP-204ENST00000447182 BRI3BPQ8WY22 251 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 TUBA1CQ9BQE3 449 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 NUSAP1Q9BXS6 441 aaKnown RBP18.99■□□□□ 0.63
SDCBP-204ENST00000447182 BRINP2Q9C0B6 783 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.99■□□□□ 0.631e-6■■■□□ 17.3
SDCBP-204ENST00000447182 RIMKLBQ9ULI2 386 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 BTRCQ9Y297 605 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 TRPV2Q9Y5S1 764 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 ANKRD36A6QL64 1941 aa18.99■□□□□ 0.63
SDCBP-204ENST00000447182 MYO16Q9Y6X6 1858 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 A0A1W2PQH9 124 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 RPP40O75818 363 aaKnown RBP18.98■□□□□ 0.63
SDCBP-204ENST00000447182 GRIK1P39086 918 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 RAB15P59190 212 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 BEX3Q00994 111 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 SEMA3AQ14563 771 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 C16orf72Q14CZ0 275 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 PAN2Q504Q3 1202 aaKnown RBP18.98■□□□□ 0.63
SDCBP-204ENST00000447182 RABL3Q5HYI8 236 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 PGBD5Q8N414 524 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 DNAJB14Q8TBM8 379 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 PSMG2Q969U7 264 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 DCUN1D5Q9BTE7 237 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 DERL2Q9GZP9 239 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 SYTL2Q9HCH5 934 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 TMEM45AQ9NWC5 275 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 TMEM9Q9P0T7 183 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 IGLV3-10A0A075B6K4 115 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 CCDC162PA2VCL2 907 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 H0YAE9 185 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 GIPC1O14908 333 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 CLIC3O95833 236 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 LDLRP01130 860 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 FGF1P05230 155 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 RPS17P08708 135 aaKnown RBP18.98■□□□□ 0.63
SDCBP-204ENST00000447182 HLA-DPA1P20036 260 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 EEF1DP29692 281 aaKnown RBP18.98■□□□□ 0.63
SDCBP-204ENST00000447182 APLP1P51693 650 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 ADARB1P78563 741 aaKnown RBP18.98■□□□□ 0.63
SDCBP-204ENST00000447182 GRSF1Q12849 480 aaKnown RBP eCLIP18.98■□□□□ 0.63
SDCBP-204ENST00000447182 TYSND1Q2T9J0 566 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 EFL1Q7Z2Z2 1120 aaKnown RBP18.98■□□□□ 0.63
SDCBP-204ENST00000447182 SPATA2LQ8IUW3 424 aaPredicted RBP18.98■□□□□ 0.63
SDCBP-204ENST00000447182 FBXO39Q8N4B4 442 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 RSPH1Q8WYR4 309 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 ZNF599Q96NL3 588 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 C1QTNF3Q9BXJ4 246 aa18.98■□□□□ 0.63
SDCBP-204ENST00000447182 A0A1B0GTL3 188 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 NPPAP01160 153 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 EPOP01588 193 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 HTR1EP28566 365 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 HLCSP50747 726 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 STC1P52823 247 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 XKR7Q5GH72 579 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 MS4A13Q5J8X5 152 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 PAGE3Q5JUK9 113 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 ANKS6Q68DC2 871 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 TMEM199Q8N511 208 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 BRSK1Q8TDC3 778 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 OSCP1Q8WVF1 389 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 TEX37Q96LM6 180 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 POLR1BQ9H9Y6 1135 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 CATSPERZQ9NTU4 200 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 PKD2L2Q9NZM6 624 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 LEF1Q9UJU2 399 aaPredicted RBP18.97■□□□□ 0.63
SDCBP-204ENST00000447182 ARL5AQ9Y689 179 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 TTC3P53804 2025 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 CNTN5O94779 1100 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 IL10RBQ08334 325 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 ZNF829Q3KNS6 432 aaPredicted RBP18.97■□□□□ 0.63
SDCBP-204ENST00000447182 PDCD4Q53EL6 469 aaKnown RBP18.97■□□□□ 0.63
SDCBP-204ENST00000447182 ALFQ53S48 1182 aa18.97■□□□□ 0.63
SDCBP-204ENST00000447182 CCNYL2Q5T2Q4 361 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms