RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 PTCH1Q13635 1447 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 PFASO15067 1338 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 CDHR2Q9BYE9 1310 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 STK36Q9NRP7 1315 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 A0A087WUV0 522 aaPredicted RBP2.78□□□□□ -1.96
UBBP3-201ENST00000445497 SENP3-EIF4A1A0A087X0R7 540 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 ST20-MTHFSA0A0A6YYL1 179 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 SMIM30A4D0T7 59 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 BTBD17A6NE02 478 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 SOWAHBA6NEL2 793 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 HELTA6NFD8 242 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 SRRM3A6NNA2 597 aaPredicted RBP2.78□□□□□ -1.96
UBBP3-201ENST00000445497 FAM171A2A8MVW0 826 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 MEI4A8MW99 385 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 A8MXQ7 604 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 MIF4GDA9UHW6 222 aaKnown RBP2.78□□□□□ -1.96
UBBP3-201ENST00000445497 ERVV-2B6SEH9 535 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 B8ZZF3 427 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 FAM47E-STBD1D6RA91 191 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 H0YJX3 145 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 TLR4O00206 839 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 GRM8O00222 908 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 PGRMC1O00264 195 aaKnown RBP2.78□□□□□ -1.96
UBBP3-201ENST00000445497 GPR171O14626 319 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 RGS13O14921 159 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 CHUKO15111 745 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 BET1O15155 118 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 PPM1DO15297 605 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 INSIG1O15503 277 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 SPINT1O43278 529 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 EFSO43281 561 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 TNFSF14O43557 240 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 NOBOXO60393 691 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 TRIM13O60858 407 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 CDH16O75309 829 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 VPS4BO75351 444 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 DNAJB5O75953 348 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 CLPXO76031 633 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 IL1BP01584 269 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 IL2RAP01589 272 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 CFIP05156 583 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 LYNP07948 512 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 SERPINA6P08185 405 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 KRT16P08779 473 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 LINGO3P0C6S8 592 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 MCF2P10911 925 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 LCP1P13796 627 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 SELLP14151 372 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 CPA1P15085 419 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 CPB1P15086 417 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 CD19P15391 556 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 RPA2P15927 270 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 EGR1P18146 543 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 PTPRAP18433 802 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 TNNI3P19429 210 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 EDNRBP24530 442 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 CCNE1P24864 410 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 KLRC1P26715 233 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 SERPINA4P29622 427 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 HOXA13P31271 388 aaPredicted RBP2.78□□□□□ -1.96
UBBP3-201ENST00000445497 SLC8A1P32418 973 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 HMGCLP35914 325 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 CASRP41180 1078 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 PRKCIP41743 596 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 ECI1P42126 302 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 FRKP42685 505 aaPredicted RBP2.78□□□□□ -1.96
UBBP3-201ENST00000445497 MAGEA2P43356 314 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 GPR4P46093 362 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 SLC6A11P48066 632 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 KCNJ5P48544 419 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 CASP4P49662 377 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 SERPINB9P50453 376 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 SERPINH1P50454 418 aaKnown RBP2.78□□□□□ -1.96
UBBP3-201ENST00000445497 CCNG1P51959 295 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 MFAP4P55083 255 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 SRP54P61011 504 aaKnown RBP2.78□□□□□ -1.96
UBBP3-201ENST00000445497 SKP1P63208 163 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 FAM189BP81408 668 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 IRF9Q00978 393 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 GCNT1Q02742 428 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 TLE1Q04724 770 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 LRRC63Q05C16 580 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 ZNF33BQ06732 778 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 TGM3Q08188 693 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 HYAL2Q12891 473 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 MALLQ13021 153 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 RAB32Q13637 225 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 BOP1Q14137 746 aaKnown RBP2.78□□□□□ -1.96
UBBP3-201ENST00000445497 GPR176Q14439 515 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 TMEM132BQ14DG7 1078 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 TESK1Q15569 626 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 CEBPEQ15744 281 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 MAPK11Q15759 364 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 GRIK4Q16099 956 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 MAPK6Q16659 721 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 IFI44LQ53G44 452 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 GLE1Q53GS7 698 aaKnown RBP2.78□□□□□ -1.96
UBBP3-201ENST00000445497 C2CD6Q53TS8 623 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 C3orf38Q5JPI3 329 aa2.78□□□□□ -1.96
UBBP3-201ENST00000445497 TEX30Q5JUR7 227 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms