RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 KNL1Q8NG31 2342 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 FADS2P1A8MWK0 482 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 CCDC188H7C350 402 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 INPP4BO15327 924 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 VEGFDO43915 354 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 TRIM16O95361 564 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 ECEL1O95672 775 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 TUBB4AP04350 444 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 CDK4P11802 303 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 TPSB2P20231 275 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 RPIAP49247 311 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 DUSP3P51452 185 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-211ENST00000443563 SIM1P81133 766 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-211ENST00000443563 ILF3Q12906 894 aaKnown RBP eCLIP10.75□□□□□ -0.69
HDAC6-211ENST00000443563 GPS1Q13098 491 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 TPSAB1Q15661 275 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 SKIDA1Q1XH10 827 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 LDLRAP1Q5SW96 308 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 ZCCHC8Q6NZY4 707 aaKnown RBP10.75□□□□□ -0.69
HDAC6-211ENST00000443563 DOK6Q6PKX4 331 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 NLRP9Q7RTR0 991 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 GALNT13Q8IUC8 556 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 CREG2Q8IUH2 290 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 RBFAQ8N0V3 343 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 FAM181AQ8N9Y4 354 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 OR52K1Q8NGK4 314 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 STYXQ8WUJ0 223 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 GLYATL1Q969I3 302 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 PDXPQ96GD0 296 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 SCARF2Q96GP6 870 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-211ENST00000443563 GSDMCQ9BYG8 508 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 ZCCHC2Q9C0B9 1178 aaKnown RBP10.75□□□□□ -0.69
HDAC6-211ENST00000443563 TRIM39Q9HCM9 518 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 IL26Q9NPH9 171 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 CASS4Q9NQ75 786 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 TRNAU1APQ9NX07 287 aaKnown RBP10.75□□□□□ -0.69
HDAC6-211ENST00000443563 SMARCAL1Q9NZC9 954 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 PCYOX1Q9UHG3 505 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 PNMA8BQ9ULN7 279 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-211ENST00000443563 SUFUQ9UMX1 484 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 BTBD3Q9Y2F9 522 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 MYLKQ15746 1914 aa10.75□□□□□ -0.69
HDAC6-211ENST00000443563 CABIN1Q9Y6J0 2220 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 HEATR9A2RTY3 570 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 FFAR2O15552 330 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 LDB2O43679 373 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 BUD23O43709 281 aaKnown RBP10.74□□□□□ -0.69
HDAC6-211ENST00000443563 CKMT2P17540 419 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 ADRA1DP25100 572 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 GNPDA1P46926 289 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 NPY2RP49146 381 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 DAB2P98082 770 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 ILKQ13418 452 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 MSLNQ13421 630 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-211ENST00000443563 C1orf61Q13536 156 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 GTF2H3Q13889 308 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 LRP8Q14114 963 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 SEPT6Q14141 434 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 POU6F1Q14863 301 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 PPP1R7Q15435 360 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 TRIP13Q15645 432 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-211ENST00000443563 ATP13A5Q4VNC0 1218 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 ARMC3Q5W041 872 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 FAM151BQ6UXP7 276 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 SYT10Q6XYQ8 523 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 SYDE1Q6ZW31 735 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-211ENST00000443563 TAF8Q7Z7C8 310 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 PRUNE1Q86TP1 453 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 C17orf53Q8N3J3 647 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-211ENST00000443563 GDAP1Q8TB36 358 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 SLCO2A1Q92959 643 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 ULK4Q96C45 1275 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 TTC25Q96NG3 672 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 OR2M4Q96R27 311 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 RANBP9Q96S59 729 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 CLPBQ9H078 707 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 TCEAL2Q9H3H9 227 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-211ENST00000443563 MRPL40Q9NQ50 206 aaKnown RBP10.74□□□□□ -0.69
HDAC6-211ENST00000443563 NLE1Q9NVX2 485 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-211ENST00000443563 BFARQ9NZS9 450 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 RIMKLBQ9ULI2 386 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 CNOT6Q9ULM6 557 aaKnown RBP10.74□□□□□ -0.69
HDAC6-211ENST00000443563 TMEM98Q9Y2Y6 226 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 SLC30A1Q9Y6M5 507 aa10.74□□□□□ -0.69
HDAC6-211ENST00000443563 H7C0S8 307 aa10.73□□□□□ -0.69
HDAC6-211ENST00000443563 KIF2AO00139 706 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-211ENST00000443563 GIPC1O14908 333 aa10.73□□□□□ -0.69
HDAC6-211ENST00000443563 YY2O15391 372 aa10.73□□□□□ -0.69
HDAC6-211ENST00000443563 SIGLEC6O43699 453 aa10.73□□□□□ -0.69
HDAC6-211ENST00000443563 NUAK1O60285 661 aa10.73□□□□□ -0.69
HDAC6-211ENST00000443563 SRP72O76094 671 aaKnown RBP10.73□□□□□ -0.69
HDAC6-211ENST00000443563 PRAMEF1O95521 474 aa10.73□□□□□ -0.69
HDAC6-211ENST00000443563 TPH1P17752 444 aa10.73□□□□□ -0.69
HDAC6-211ENST00000443563 ITGALP20701 1170 aa10.73□□□□□ -0.69
HDAC6-211ENST00000443563 MAGEA6P43360 314 aa10.73□□□□□ -0.69
HDAC6-211ENST00000443563 POLD2P49005 469 aa10.73□□□□□ -0.69
HDAC6-211ENST00000443563 VPS41P49754 854 aa10.73□□□□□ -0.69
HDAC6-211ENST00000443563 ZNF140P52738 457 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-211ENST00000443563 CHRNA6Q15825 494 aa10.73□□□□□ -0.69
HDAC6-211ENST00000443563 DEFB133Q30KQ1 61 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms