RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 EPHB2P29323 1055 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 HSD17B2P37059 387 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 GTF2A1P52655 376 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 TAS2R40P59535 323 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 PTK6Q13882 451 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 PFKFB3Q16875 520 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 TYSND1Q2T9J0 566 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 LEXMQ3ZCV2 418 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 NHSL2Q5HYW2 709 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 RARS2Q5T160 578 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 TMEM63BQ5T3F8 832 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 RBM44Q6ZP01 1051 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 ARL14EPQ8N8R7 260 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 SPERTQ8NA61 448 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 RBM15BQ8NDT2 890 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 IGSF8Q969P0 613 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 HDAC11Q96DB2 347 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 NAF1Q96HR8 494 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 CCDC17Q96LX7 622 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 RUNDC3BQ96NL0 473 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 SH3GL1Q99961 368 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 TM2D2Q9BX73 214 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 TRIM7Q9C029 511 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 LRRCC1Q9C099 1032 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 NRIP3Q9NQ35 241 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 DDX18Q9NVP1 670 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 PARPBPQ9NWS1 579 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 PLEKHB1Q9UF11 243 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 SLC8A2Q9UPR5 921 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 ZNF148Q9UQR1 794 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 KLHL20Q9Y2M5 609 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 KIF13AQ9H1H9 1805 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 A0A0U1RQF3 1178 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 OTOL1A6NHN0 477 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 AP3B1O00203 1094 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 OGG1O15527 345 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 SLC22A3O75751 556 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 ZWINTO95229 277 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 SNRNP70P08621 437 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 ACTN1P12814 892 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 ETFAP13804 333 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 GAP43P17677 238 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 CTPS1P17812 591 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 SORDQ00796 357 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 GRSF1Q12849 480 aaKnown RBP eCLIP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 TUBB2AQ13885 445 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 ZNF273Q14593 569 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 PRKD1Q15139 912 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 SGO1Q5FBB7 561 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 LCNL1Q6ZST4 164 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 SLC29A4Q7RTT9 530 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 TSPAN33Q86UF1 283 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 C1orf210Q8IVY1 113 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 TUSC5Q8IXB3 177 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 SIX6OS1Q8N1H7 587 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 AFAP1Q8N556 730 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 ZBTB44Q8NCP5 570 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 SHC3Q92529 594 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 PIGKQ92643 395 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 CHFRQ96EP1 664 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 DAZAP1Q96EP5 407 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 DHTKD1Q96HY7 919 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 MGME1Q9BQP7 344 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 TUBB2BQ9BVA1 445 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 MLST8Q9BVC4 326 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 NUP85Q9BW27 656 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 ZNF703Q9H7S9 590 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 VPS37BQ9H9H4 285 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 DDX4Q9NQI0 724 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 HPCAL4Q9UM19 191 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 WBP11Q9Y2W2 641 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 A3GALT2U3KPV4 340 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 ARID1BQ8NFD5 2236 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 ARHGEF40Q8TER5 1519 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 EDDM13A0A1B0GTR0 161 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 TYW5A2RUC4 315 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 CCDC151A5D8V7 595 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 ZSCAN5CA6NGD5 496 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 DDX39AO00148 427 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 TULP2O00295 520 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 CACNB4O00305 520 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 ATP2A1O14983 1001 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 STX6O43752 255 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 CYP2A6P11509 494 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 PRLRP16471 622 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 DNASE1P24855 282 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 ATP5OP48047 213 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 RAB28P51157 221 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 CLCNKBP51801 687 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 IRX1P78414 480 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 SCN1BQ07699 218 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 ACTN3Q08043 901 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 CCDC173Q0VFZ6 552 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 PKP1Q13835 747 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 SYCP1Q15431 976 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 PPP1R7Q15435 360 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 SNAPC1Q16533 368 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 MEP1BQ16820 701 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 IMMTQ16891 758 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 PROSER3Q2NL68 480 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms