RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 AADATQ8N5Z0 425 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 ZNF527Q8NB42 609 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 OTUD7AQ8TE49 926 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 TRIB2Q92519 343 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 MTBPQ96DY7 904 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 ZNF385AQ96PM9 386 aaKnown RBP2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 TUBA1CQ9BQE3 449 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 MMP28Q9H239 520 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 CXorf56Q9H5V9 222 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 UBTD1Q9HAC8 227 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 KCND3Q9UK17 655 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 PAM16Q9Y3D7 125 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 ADAM18Q9Y3Q7 739 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 MORC2Q9Y6X9 1032 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 TENM1Q9UKZ4 2725 aa2.95□□□□□ -1.94
HMGB1P18-201ENST00000438801 MGAM2Q2M2H8 2515 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 MYH14Q7Z406 1995 aaKnown RBP2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 URB1O60287 2271 aaKnown RBP2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 KMT2CQ8NEZ4 4911 aaKnown RBP2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 IGHV4OR15-8A0A075B7B6 117 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 YDJCA8MPS7 323 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 SYT5O00445 386 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 SKAP2O75563 359 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 KCNK5O95279 499 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 VNN2O95498 520 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 PMS2P2O95744 297 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 IL1AP01583 271 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 DHRS4L1P0CG22 281 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 GM2AP17900 193 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 ANOS1P23352 680 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 MYF6P23409 242 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 SSTR2P30874 369 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 MVDP53602 400 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 FAM27E3Q08E93 113 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 CAPSQ13938 189 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 LPIN1Q14693 890 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 RBBP5Q15291 538 aaKnown RBP2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 PGBD2Q6P3X8 592 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 CCDC174Q6PII3 467 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 KLHL24Q6TFL4 600 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 GDPD4Q6W3E5 623 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 FSIP1Q8NA03 581 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 MCPH1Q8NEM0 835 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 RASSF8Q8NHQ8 419 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 STT3BQ8TCJ2 826 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 RBMXL1Q96E39 390 aaKnown RBP2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 MOCOSQ96EN8 888 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 PGLYRP2Q96PD5 576 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 OR1F2PQ96R84 312 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 NLKQ9UBE8 527 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 WNK1Q9H4A3 2382 aa2.94□□□□□ -1.94
HMGB1P18-201ENST00000438801 PCDH11YQ9BZA8 1340 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 WDR81Q562E7 1941 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 DCHS2Q6V1P9 2916 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 EPPK1P58107 5090 aaKnown RBP2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 CSMD2Q7Z408 3487 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 DUOX1Q9NRD9 1551 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 EIF3AQ14152 1382 aaKnown RBP2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 HNRNPCL2B2RXH8 293 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 J3KR12 359 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 CAND2O75155 1236 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 METTL18O95568 372 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 PDIA3P30101 505 aaKnown RBP2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 GJC1P36383 396 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 SERPINF1P36955 418 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 MTNR1AP48039 350 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 NLRP5P59047 1200 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 GALNT1Q10472 559 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 DMP1Q13316 513 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 BYSLQ13895 437 aaKnown RBP2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 IL13RA2Q14627 380 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 RPE65Q16518 533 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 AP5B1Q2VPB7 878 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 FAM69BQ5VUD6 431 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 LIN54Q6MZP7 749 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 FOXL2NBQ6ZUU3 175 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 RRAGAQ7L523 313 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 TRMT1LQ7Z2T5 733 aaKnown RBP2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 MB21D2Q8IYB1 491 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 MAB21L3Q8N8X9 362 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 IL17RCQ8NAC3 791 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 FEM1CQ96JP0 617 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 TRAPPC9Q96Q05 1148 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 EBF2Q9HAK2 575 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 PLEKHA2Q9HB19 425 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 NLRC4Q9NPP4 1024 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 ATP8A2Q9NTI2 1148 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 OR6C3Q9NZP0 311 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 LRFN1Q9P244 771 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 GMEB2Q9UKD1 530 aa2.93□□□□□ -1.94
HMGB1P18-201ENST00000438801 APCP25054 2843 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 RALGAPA1Q6GYQ0 2036 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 A0A087WV62 115 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 CCL15-CCL14A0A0B4J2E2 113 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 SEPT4O43236 478 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 GAGE7O76087 117 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 CRYAAP02489 173 aa2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 KRT18P05783 430 aaKnown RBP2.92□□□□□ -1.94
HMGB1P18-201ENST00000438801 GAGE12FP0CL80 117 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms