RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 RAET1GQ6H3X3 334 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 RWDD4Q6NW29 188 aaKnown RBP9.05□□□□□ -0.96
LSG1-202ENST00000427461 CERS6Q6ZMG9 384 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 SPOCD1Q6ZMY3 1216 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 C11orf57Q6ZUT1 292 aaPredicted RBP9.05□□□□□ -0.96
LSG1-202ENST00000427461 DPPA4Q7L190 304 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 ZNF765Q7L2R6 523 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 CXXC5Q7LFL8 322 aaKnown RBP9.05□□□□□ -0.96
LSG1-202ENST00000427461 SLC9B2Q86UD5 537 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 FAM131BQ86XD5 332 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 DNAAF5Q86Y56 855 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 PASD1Q8IV76 773 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 KLHL6Q8WZ60 621 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 NRGNQ92686 78 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 KREMEN1Q96MU8 473 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 ZNF641Q96N77 438 aaPredicted RBP9.05□□□□□ -0.96
LSG1-202ENST00000427461 SMR3AQ99954 134 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 SLX1AQ9BQ83 275 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 MLPHQ9BV36 600 aaPredicted RBP9.05□□□□□ -0.96
LSG1-202ENST00000427461 RAB6CQ9H0N0 254 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 MAGEH1Q9H213 219 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 STN1Q9H668 368 aaKnown RBP9.05□□□□□ -0.96
LSG1-202ENST00000427461 PDE7BQ9NP56 450 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.05□□□□□ -0.96
LSG1-202ENST00000427461 PPARGC1AQ9UBK2 798 aaKnown RBP9.05□□□□□ -0.96
LSG1-202ENST00000427461 CPNE7Q9UBL6 633 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 SUCOQ9UBS9 1254 aaKnown RBP9.05□□□□□ -0.96
LSG1-202ENST00000427461 SH3BGRL2Q9UJC5 107 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 KCNK6Q9Y257 313 aa9.05□□□□□ -0.96
LSG1-202ENST00000427461 RPH3AQ9Y2J0 694 aaPredicted RBP9.05□□□□□ -0.96
LSG1-202ENST00000427461 A0A1W2PQJ5 194 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 FAM72CH0Y354 149 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 TOX3O15405 576 aaPredicted RBP9.04□□□□□ -0.96
LSG1-202ENST00000427461 ACTN4O43707 911 aaKnown RBP9.04□□□□□ -0.96
LSG1-202ENST00000427461 UBXN7O94888 489 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 ALPPP05187 535 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 AMD1P17707 334 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 NELFEP18615 380 aaKnown RBP9.04□□□□□ -0.96
LSG1-202ENST00000427461 ETV3P41162 512 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 MAPKAPK2P49137 400 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 IST1P53990 364 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 PPP1CAP62136 330 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 PPP2R2AP63151 447 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 PDE1BQ01064 536 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 CDC16Q13042 620 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 CNGA3Q16281 694 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 INO80DQ53TQ3 878 aaPredicted RBP9.04□□□□□ -0.96
LSG1-202ENST00000427461 FAM72AQ5TYM5 149 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 FAM72DQ6L9T8 149 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 RFLNAQ6ZTI6 216 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 SLC26A9Q7LBE3 791 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 CHST15Q7LFX5 561 aaPredicted RBP9.04□□□□□ -0.96
LSG1-202ENST00000427461 HSD11B1LQ7Z5J1 315 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 FAM72BQ86X60 149 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 CEP57L1Q8IYX8 460 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 GALNT16Q8N428 558 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 LMO3Q8TAP4 145 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 RSC1A1Q92681 617 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 NT5C3BQ969T7 300 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 PGAP3Q96FM1 320 aaPredicted RBP9.04□□□□□ -0.96
LSG1-202ENST00000427461 NSMCE3Q96MG7 304 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.04□□□□□ -0.96
LSG1-202ENST00000427461 GTPBP4Q9BZE4 634 aaKnown RBP9.04□□□□□ -0.96
LSG1-202ENST00000427461 EPB41L1Q9H4G0 881 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 NOL6Q9H6R4 1146 aaKnown RBP9.04□□□□□ -0.96
LSG1-202ENST00000427461 WASH6PQ9NQA3 447 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 DLL4Q9NR61 685 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 TMEM248Q9NWD8 314 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 B4GALT6Q9UBX8 382 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 NEU3Q9UQ49 428 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 CSPG4Q6UVK1 2322 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 NBEAL1Q6ZS30 2694 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 CACNA1CQ13936 2221 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 CCDC88CQ9P219 2028 aa9.04□□□□□ -0.96
LSG1-202ENST00000427461 IGHV5-51A0A0C4DH38 117 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 A0A0U1RQS6 177 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 CCDC78A2IDD5 438 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 LILRA5A6NI73 299 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 CETN3O15182 167 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 MED7O43513 233 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 CPNE3O75131 537 aaKnown RBP9.03□□□□□ -0.96
LSG1-202ENST00000427461 SCRG1O75711 98 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 SOD1P00441 154 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 CAPN1P07384 714 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 EBLN1P0CF75 366 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 RHOQP17081 205 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 TNFAIP3P21580 790 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 GNA15P30679 374 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 DNAJA1P31689 397 aaKnown RBP9.03□□□□□ -0.96
LSG1-202ENST00000427461 OTX2P32243 289 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 PBX1P40424 430 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 FMO5P49326 533 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 ADORA2A-AS1P86434 159 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 OTUD4Q01804 1114 aaKnown RBP9.03□□□□□ -0.96
LSG1-202ENST00000427461 PTPRRQ15256 657 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 MANEALQ5VSG8 457 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 PLEKHA7Q6IQ23 1121 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 TRNP1Q6NT89 227 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 Q6ZVL8 140 aa9.03□□□□□ -0.96
LSG1-202ENST00000427461 PRSS42Q7Z5A4 293 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms