RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 TRHDEQ9UKU6 1024 aa16.28■□□□□ 0.2
DDR1-231ENST00000417521 PCDHB1Q9Y5F3 818 aa16.28■□□□□ 0.2
DDR1-231ENST00000417521 ANKRD11Q6UB99 2663 aaPredicted RBP16.27■□□□□ 0.2
DDR1-231ENST00000417521 LOC285095A0A1B0GVY8 99 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 NOBOXO60393 691 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 CSO75390 466 aaKnown RBP16.27■□□□□ 0.19
DDR1-231ENST00000417521 PMPCBO75439 489 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 PNLIPP16233 465 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 GLB1P16278 677 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 NFKB1P19838 968 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 CASQ1P31415 396 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 DEKP35659 375 aaKnown RBP16.27■□□□□ 0.19
DDR1-231ENST00000417521 ADCY8P40145 1251 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 SIX1Q15475 284 aaPredicted RBP16.27■□□□□ 0.19
DDR1-231ENST00000417521 RBM44Q6ZP01 1051 aaKnown RBP16.27■□□□□ 0.19
DDR1-231ENST00000417521 ZNF567Q8N184 647 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 RASGEF1CQ8N431 466 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 TTC13Q8NBP0 860 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 EID2BQ96D98 161 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 FERMT1Q9BQL6 677 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 UBP1Q9NZI7 540 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 APPL1Q9UKG1 709 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 CNOT6Q9ULM6 557 aaKnown RBP16.27■□□□□ 0.19
DDR1-231ENST00000417521 RAXQ9Y2V3 346 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 TMEM98Q9Y2Y6 226 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 FASNP49327 2511 aaKnown RBP16.27■□□□□ 0.19
DDR1-231ENST00000417521 PLXNB3Q9ULL4 1909 aa16.27■□□□□ 0.19
DDR1-231ENST00000417521 NTN3O00634 580 aaPredicted RBP16.26■□□□□ 0.19
DDR1-231ENST00000417521 RBP3P10745 1247 aa16.26■□□□□ 0.19
DDR1-231ENST00000417521 TCP1P17987 556 aaKnown RBP16.26■□□□□ 0.19
DDR1-231ENST00000417521 CTBSQ01459 385 aa16.26■□□□□ 0.19
DDR1-231ENST00000417521 HLTFQ14527 1009 aaKnown RBP eCLIP16.26■□□□□ 0.19
DDR1-231ENST00000417521 C14orf28Q4W4Y0 310 aa16.26■□□□□ 0.19
DDR1-231ENST00000417521 CERCAMQ5T4B2 595 aa16.26■□□□□ 0.19
DDR1-231ENST00000417521 DOK6Q6PKX4 331 aa16.26■□□□□ 0.19
DDR1-231ENST00000417521 KDELC1Q6UW63 502 aa16.26■□□□□ 0.19
DDR1-231ENST00000417521 PTCD2Q8WV60 388 aaKnown RBP16.26■□□□□ 0.19
DDR1-231ENST00000417521 C1orf54Q8WWF1 131 aa16.26■□□□□ 0.19
DDR1-231ENST00000417521 CCDC74AQ96AQ1 378 aa16.26■□□□□ 0.19
DDR1-231ENST00000417521 GPR63Q9BZJ6 419 aa16.26■□□□□ 0.19
DDR1-231ENST00000417521 SUDS3Q9H7L9 328 aaPredicted RBP16.26■□□□□ 0.19
DDR1-231ENST00000417521 SPATS2LQ9NUQ6 558 aaKnown RBP16.26■□□□□ 0.19
DDR1-231ENST00000417521 VPS18Q9P253 973 aa16.26■□□□□ 0.19
DDR1-231ENST00000417521 NFKBIL1Q9UBC1 381 aaPredicted RBP16.26■□□□□ 0.19
DDR1-231ENST00000417521 SHOC2Q9UQ13 582 aa16.26■□□□□ 0.19
DDR1-231ENST00000417521 SAR1BQ9Y6B6 198 aa16.26■□□□□ 0.19
DDR1-231ENST00000417521 APC2O95996 2303 aa16.26■□□□□ 0.19
DDR1-231ENST00000417521 B4DGG1 531 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 INPP4BO15327 924 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 NUDT21O43809 227 aaKnown RBP16.25■□□□□ 0.19
DDR1-231ENST00000417521 USP12O75317 370 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 ASMTLO95671 621 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 PIRTP0C851 137 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 HOXB3P14651 431 aaPredicted RBP16.25■□□□□ 0.19
DDR1-231ENST00000417521 RBL1P28749 1068 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 TNNT3P45378 269 aaPredicted RBP16.25■□□□□ 0.19
DDR1-231ENST00000417521 WNT3AP56704 352 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 DCDC1P59894 354 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 SNX1Q13596 522 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 LRP8Q14114 963 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 SPIDRQ14159 915 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 PYCR3Q53H96 274 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 DARS2Q6PI48 645 aaKnown RBP16.25■□□□□ 0.19
DDR1-231ENST00000417521 TRIM74Q86UV6 250 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 C17orf82Q86X59 251 aaPredicted RBP16.25■□□□□ 0.19
DDR1-231ENST00000417521 LSMEM2Q8N112 164 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 SLC35B2Q8TB61 432 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 CAPZA3Q96KX2 299 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 OR2M4Q96R27 311 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 TRABDQ9H4I3 376 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 TAAR2Q9P1P5 351 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 RABGEF1Q9UJ41 708 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 ZNF711Q9Y462 761 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 GPSM3Q9Y4H4 160 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 PTPRBP23467 1997 aa16.25■□□□□ 0.19
DDR1-231ENST00000417521 FADS2P1A8MWK0 482 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 PGRMC1O00264 195 aaKnown RBP16.24■□□□□ 0.19
DDR1-231ENST00000417521 CES2O00748 559 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 LIASO43766 372 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 ZNF189O75820 626 aaPredicted RBP16.24■□□□□ 0.19
DDR1-231ENST00000417521 FGF1P05230 155 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 AK4P27144 223 aaPredicted RBP16.24■□□□□ 0.19
DDR1-231ENST00000417521 LSSP48449 732 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 MPP3Q13368 585 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 PDPK2PQ6A1A2 396 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 GALNT13Q8IUC8 556 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 CDKL3Q8IVW4 592 aaPredicted RBP16.24■□□□□ 0.19
DDR1-231ENST00000417521 GPR26Q8NDV2 337 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 ACTRT1Q8TDG2 376 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 ZDHHC1Q8WTX9 485 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 OXNAD1Q96HP4 312 aaPredicted RBP16.24■□□□□ 0.19
DDR1-231ENST00000417521 MRGPRX2Q96LB1 330 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 ZSCAN5AQ9BUG6 496 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 AP1M1Q9BXS5 423 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 POLR1BQ9H9Y6 1135 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 LRIT1Q9P2V4 623 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 TTC7AQ9ULT0 858 aaPredicted RBP16.24■□□□□ 0.19
DDR1-231ENST00000417521 ENTPD2Q9Y5L3 495 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 ST14Q9Y5Y6 855 aa16.24■□□□□ 0.19
DDR1-231ENST00000417521 LAMA5O15230 3695 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms