RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 CMKLR1Q99788 373 aa24.79■■□□□ 1.56
HLA-C-204ENST00000415537 GOLPH3Q9H4A6 298 aa24.79■■□□□ 1.56
HLA-C-204ENST00000415537 GLOD4Q9HC38 313 aa24.79■■□□□ 1.56
HLA-C-204ENST00000415537 MAGEE1Q9HCI5 957 aa24.79■■□□□ 1.56
HLA-C-204ENST00000415537 SHOC2Q9UQ13 582 aa24.79■■□□□ 1.56
HLA-C-204ENST00000415537 LOXL2Q9Y4K0 774 aa24.79■■□□□ 1.56
HLA-C-204ENST00000415537 PTPRQQ9UMZ3 2332 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 TEX51A0A1B0GUA7 166 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 FADS2P1A8MWK0 482 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 MT-CYBP00156 380 aaPredicted RBP24.78■■□□□ 1.56
HLA-C-204ENST00000415537 HGFP14210 728 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 PTPN3P26045 913 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 PRKD1Q15139 912 aaPredicted RBP24.78■■□□□ 1.56
HLA-C-204ENST00000415537 SLC14A2Q15849 920 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 TAZQ16635 292 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 CHST15Q7LFX5 561 aaPredicted RBP24.78■■□□□ 1.56
HLA-C-204ENST00000415537 RCOR2Q8IZ40 523 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 SPATA22Q8NHS9 363 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 TEKT5Q96M29 485 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 BBC3Q96PG8 261 aaPredicted RBP24.78■■□□□ 1.56
HLA-C-204ENST00000415537 SPATA16Q9BXB7 569 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 GPR63Q9BZJ6 419 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 RMI1Q9H9A7 625 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 RDH14Q9HBH5 336 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 RAD18Q9NS91 495 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 AKAP7Q9P0M2 348 aaPredicted RBP24.78■■□□□ 1.56
HLA-C-204ENST00000415537 PISDQ9UG56 409 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 CNOT6Q9ULM6 557 aaKnown RBP24.78■■□□□ 1.56
HLA-C-204ENST00000415537 SCN8AQ9UQD0 1980 aa24.78■■□□□ 1.56
HLA-C-204ENST00000415537 LOC400499M0QZD8 3231 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 AGRPO00253 132 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 MTSS1O43312 755 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 DNAJC6O75061 913 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 SLC4A1P02730 911 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 PIRTP0C851 137 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 TNNT3P45378 269 aaPredicted RBP24.77■■□□□ 1.56
HLA-C-204ENST00000415537 NR1D2Q14995 579 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 USP53Q70EK8 1073 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 KATNAL2Q8IYT4 538 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 SRPK1Q96SB4 655 aaKnown RBP24.77■■□□□ 1.56
HLA-C-204ENST00000415537 WDR70Q9NW82 654 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 TFR2Q9UP52 801 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 ZNF711Q9Y462 761 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 PRKAB1Q9Y478 270 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 PCDHGA7Q9Y5G6 932 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 OAS3Q9Y6K5 1087 aaKnown RBP24.77■■□□□ 1.56
HLA-C-204ENST00000415537 BPTFQ12830 3046 aa24.77■■□□□ 1.56
HLA-C-204ENST00000415537 PPM1DO15297 605 aa24.76■■□□□ 1.55
HLA-C-204ENST00000415537 PMPCBO75439 489 aa24.76■■□□□ 1.55
HLA-C-204ENST00000415537 IPO7O95373 1038 aaKnown RBP24.76■■□□□ 1.55
HLA-C-204ENST00000415537 PECAM1P16284 738 aaPredicted RBP24.76■■□□□ 1.55
HLA-C-204ENST00000415537 SLC5A2P31639 672 aa24.76■■□□□ 1.55
HLA-C-204ENST00000415537 CLPPQ16740 277 aaPredicted RBP24.76■■□□□ 1.55
HLA-C-204ENST00000415537 ALS2CLQ60I27 953 aa24.76■■□□□ 1.55
HLA-C-204ENST00000415537 TMPRSS9Q7Z410 1059 aa24.76■■□□□ 1.55
HLA-C-204ENST00000415537 TMC3Q7Z5M5 1100 aa24.76■■□□□ 1.55
HLA-C-204ENST00000415537 DAAM2Q86T65 1068 aa24.76■■□□□ 1.55
HLA-C-204ENST00000415537 ZC3H18Q86VM9 953 aaKnown RBP24.76■■□□□ 1.55
HLA-C-204ENST00000415537 SLITRK4Q8IW52 837 aa24.76■■□□□ 1.55
HLA-C-204ENST00000415537 TADA1Q96BN2 335 aa24.76■■□□□ 1.55
HLA-C-204ENST00000415537 EID2BQ96D98 161 aa24.76■■□□□ 1.55
HLA-C-204ENST00000415537 RBM41Q96IZ5 413 aaKnown RBP24.76■■□□□ 1.55
HLA-C-204ENST00000415537 ZSCAN5AQ9BUG6 496 aa24.76■■□□□ 1.55
HLA-C-204ENST00000415537 SEMA6CQ9H3T2 930 aa24.76■■□□□ 1.55
HLA-C-204ENST00000415537 CPNE5Q9HCH3 593 aa24.76■■□□□ 1.55
HLA-C-204ENST00000415537 UBP1Q9NZI7 540 aa24.76■■□□□ 1.55
HLA-C-204ENST00000415537 TRBV23OR9-2A0A075B6M9 112 aa24.75■■□□□ 1.55
HLA-C-204ENST00000415537 SLC25A14O95258 325 aaPredicted RBP24.75■■□□□ 1.55
HLA-C-204ENST00000415537 NDST3O95803 873 aa24.75■■□□□ 1.55
HLA-C-204ENST00000415537 PPM1FP49593 454 aaPredicted RBP24.75■■□□□ 1.55
HLA-C-204ENST00000415537 ZNF569Q5MCW4 686 aa24.75■■□□□ 1.55
HLA-C-204ENST00000415537 ARHGAP40Q5TG30 622 aa24.75■■□□□ 1.55
HLA-C-204ENST00000415537 C11orf63Q6NUN7 778 aa24.75■■□□□ 1.55
HLA-C-204ENST00000415537 PANX2Q96RD6 677 aa24.75■■□□□ 1.55
HLA-C-204ENST00000415537 KCNK4Q9NYG8 393 aa24.75■■□□□ 1.55
HLA-C-204ENST00000415537 FAM153AQ9UHL3 310 aa24.75■■□□□ 1.55
HLA-C-204ENST00000415537 IGSF10Q6WRI0 2623 aa24.75■■□□□ 1.55
HLA-C-204ENST00000415537 hCG_1818297A0A087WSY0 165 aa24.74■■□□□ 1.55
HLA-C-204ENST00000415537 ITIH1P19827 911 aa24.74■■□□□ 1.55
HLA-C-204ENST00000415537 CD1CP29017 333 aa24.74■■□□□ 1.55
HLA-C-204ENST00000415537 ZNF75DP51815 510 aa24.74■■□□□ 1.55
HLA-C-204ENST00000415537 NAP1L1P55209 391 aaKnown RBP24.74■■□□□ 1.55
HLA-C-204ENST00000415537 DCDC1P59894 354 aa24.74■■□□□ 1.55
HLA-C-204ENST00000415537 COL9A2Q14055 689 aaPredicted RBP24.74■■□□□ 1.55
HLA-C-204ENST00000415537 GPR26Q8NDV2 337 aa24.74■■□□□ 1.55
HLA-C-204ENST00000415537 HAUS1Q96CS2 278 aa24.74■■□□□ 1.55
HLA-C-204ENST00000415537 MRFAP1L1Q96HT8 127 aa24.74■■□□□ 1.55
HLA-C-204ENST00000415537 CALR3Q96L12 384 aaKnown RBP24.74■■□□□ 1.55
HLA-C-204ENST00000415537 VAT1Q99536 393 aa24.74■■□□□ 1.55
HLA-C-204ENST00000415537 NUDT22Q9BRQ3 303 aa24.74■■□□□ 1.55
HLA-C-204ENST00000415537 ZMYND15Q9H091 742 aa24.74■■□□□ 1.55
HLA-C-204ENST00000415537 CARD9Q9H257 536 aa24.74■■□□□ 1.55
HLA-C-204ENST00000415537 STN1Q9H668 368 aaKnown RBP24.74■■□□□ 1.55
HLA-C-204ENST00000415537 KLHL8Q9P2G9 620 aaPredicted RBP24.74■■□□□ 1.55
HLA-C-204ENST00000415537 EPN1Q9Y6I3 576 aaPredicted RBP24.74■■□□□ 1.55
HLA-C-204ENST00000415537 NVLO15381 856 aaKnown RBP24.73■■□□□ 1.55
HLA-C-204ENST00000415537 GRID2O43424 1007 aa24.73■■□□□ 1.55
HLA-C-204ENST00000415537 NUAK1O60285 661 aa24.73■■□□□ 1.55
HLA-C-204ENST00000415537 ACP5P13686 325 aa24.73■■□□□ 1.55
HLA-C-204ENST00000415537 FASLGP48023 281 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms