RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 HLA-DPA1P20036 260 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 DCDC1P59894 354 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 CTBSQ01459 385 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 ILF3Q12906 894 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRIM56-202ENST00000412507 SEL1L2Q5TEA6 688 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 MEI1Q5TIA1 1274 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 CDCP2Q5VXM1 449 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 OGFOD3Q6PK18 319 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 ZNF662Q6ZS27 426 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 CACTIN-AS1Q8N1I8 211 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 TTC30BQ8N4P2 665 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 DCBLD1Q8N8Z6 715 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 BLOC1S5Q8TDH9 187 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 OR2M4Q96R27 311 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 CCDC3Q9BQI4 270 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 CCDC86Q9H6F5 360 aaKnown RBP18.7■□□□□ 0.58
TRIM56-202ENST00000412507 RAD18Q9NS91 495 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 SPATS2LQ9NUQ6 558 aaKnown RBP18.7■□□□□ 0.58
TRIM56-202ENST00000412507 GOLGA6L3A6NEY3 463 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 NRDCO43847 1150 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 FGF1P05230 155 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 OLIG2Q13516 323 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 PRPSAP1Q14558 356 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 RPS6KA1Q15418 735 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 PYCR3Q53H96 274 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 ZNF569Q5MCW4 686 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 SLC30A9Q6PML9 568 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 TRAM1L1Q8N609 369 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 SLC35B2Q8TB61 432 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 CCDC74AQ96AQ1 378 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 APOL2Q9BQE5 337 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 ZSCAN5AQ9BUG6 496 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 CDH19Q9H159 772 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 TRABDQ9H4I3 376 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 ARFGAP3Q9NP61 516 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 HACD3Q9P035 362 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 TAAR2Q9P1P5 351 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 NFKBIL1Q9UBC1 381 aaPredicted RBP18.69■□□□□ 0.58
TRIM56-202ENST00000412507 RABGEF1Q9UJ41 708 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 PCYT1BQ9Y5K3 369 aaPredicted RBP18.69■□□□□ 0.58
TRIM56-202ENST00000412507 PIKFYVEQ9Y2I7 2098 aa18.69■□□□□ 0.58
TRIM56-202ENST00000412507 URB1O60287 2271 aaKnown RBP18.69■□□□□ 0.58
TRIM56-202ENST00000412507 BPTFQ12830 3046 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 FREM2Q5SZK8 3169 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 C5orf60A6NFR6 353 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 DNAJC6O75061 913 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 ADRA1AP35348 466 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 HMGCLP35914 325 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 CYP4F3Q08477 520 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 ZNF648Q5T619 568 aaPredicted RBP18.68■□□□□ 0.58
TRIM56-202ENST00000412507 GALNT13Q8IUC8 556 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 FAM71DQ8N9W8 422 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 ZDHHC1Q8WTX9 485 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 UBE2Q2Q8WVN8 375 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 ALS2CR12Q96Q35 445 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 TMEM121Q9BTD3 319 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 SYNDIG1Q9H7V2 258 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 VPS18Q9P253 973 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 ZNHIT2Q9UHR6 403 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 PPP2R2CQ9Y2T4 447 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 AAR2Q9Y312 384 aaKnown RBP18.68■□□□□ 0.58
TRIM56-202ENST00000412507 PRKAB1Q9Y478 270 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 PCDHB1Q9Y5F3 818 aa18.68■□□□□ 0.58
TRIM56-202ENST00000412507 ZZEF1O43149 2961 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 TAF4O00268 1085 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 BUD23O43709 281 aaKnown RBP18.67■□□□□ 0.58
TRIM56-202ENST00000412507 CSO75390 466 aaKnown RBP18.67■□□□□ 0.58
TRIM56-202ENST00000412507 ZNF189O75820 626 aaPredicted RBP18.67■□□□□ 0.58
TRIM56-202ENST00000412507 SLC25A14O95258 325 aaPredicted RBP18.67■□□□□ 0.58
TRIM56-202ENST00000412507 ACTR1BP42025 376 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 GDF10P55107 478 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 ACTR1AP61163 376 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 C14orf28Q4W4Y0 310 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 RANBP10Q6VN20 620 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 ARHGEF18Q6ZSZ5 1173 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 GLT6D1Q7Z4J2 308 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 SLC13A5Q86YT5 568 aaPredicted RBP18.67■□□□□ 0.58
TRIM56-202ENST00000412507 OR6C4Q8NGE1 309 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 ATG4AQ8WYN0 398 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 PLEKHG4BQ96PX9 1271 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 DEPDC7Q96QD5 511 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 IL17CQ9P0M4 197 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 ATXN10Q9UBB4 475 aa18.67■□□□□ 0.58
TRIM56-202ENST00000412507 MAZP56270 477 aaKnown RBP18.66■□□□□ 0.58
TRIM56-202ENST00000412507 SPARCL1Q14515 664 aa18.66■□□□□ 0.58
TRIM56-202ENST00000412507 HLTFQ14527 1009 aaKnown RBP eCLIP18.66■□□□□ 0.582e-6■■■□□ 16.8
TRIM56-202ENST00000412507 CERCAMQ5T4B2 595 aa18.66■□□□□ 0.58
TRIM56-202ENST00000412507 PDPK2PQ6A1A2 396 aa18.66■□□□□ 0.58
TRIM56-202ENST00000412507 CHST15Q7LFX5 561 aaPredicted RBP18.66■□□□□ 0.58
TRIM56-202ENST00000412507 PATE1Q8WXA2 126 aa18.66■□□□□ 0.58
TRIM56-202ENST00000412507 GLYATL1Q969I3 302 aa18.66■□□□□ 0.58
TRIM56-202ENST00000412507 NXPE2Q96DL1 559 aa18.66■□□□□ 0.58
TRIM56-202ENST00000412507 OR2AG1Q9H205 316 aa18.66■□□□□ 0.58
TRIM56-202ENST00000412507 AK5Q9Y6K8 562 aa18.66■□□□□ 0.58
TRIM56-202ENST00000412507 RNF215Q9Y6U7 377 aa18.66■□□□□ 0.58
TRIM56-202ENST00000412507 DSPP15924 2871 aaKnown RBP18.65■□□□□ 0.58
TRIM56-202ENST00000412507 NUAK1O60285 661 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 USP12O75317 370 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 ECEL1O95672 775 aa18.65■□□□□ 0.58
TRIM56-202ENST00000412507 GLB1P16278 677 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms