RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 PMPCBO75439 489 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 ASMTLO95671 621 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 MT-CYBP00156 380 aaPredicted RBP13.84□□□□□ -0.19
SEC13-204ENST00000397099 FGF1P05230 155 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 NFKB1P19838 968 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 HMGCLP35914 325 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 MARCKSL1P49006 195 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 GEMP55040 296 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 WNT3AP56704 352 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 ADCY2Q08462 1091 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 BIRC2Q13490 618 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 HLTFQ14527 1009 aaKnown RBP eCLIP13.84□□□□□ -0.19
SEC13-204ENST00000397099 PTPRRQ15256 657 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 TCEA2Q15560 299 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 PYCR3Q53H96 274 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 PERM1Q5SV97 790 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 LYSMD3Q7Z3D4 306 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 C17orf82Q86X59 251 aaPredicted RBP13.84□□□□□ -0.19
SEC13-204ENST00000397099 ZNF567Q8N184 647 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 SPATA22Q8NHS9 363 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 SNIP1Q8TAD8 396 aaKnown RBP13.84□□□□□ -0.19
SEC13-204ENST00000397099 ZDHHC1Q8WTX9 485 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 CCDC74AQ96AQ1 378 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 LIN37Q96GY3 246 aaPredicted RBP13.84□□□□□ -0.19
SEC13-204ENST00000397099 C19orf43Q9BQ61 176 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 SPATA16Q9BXB7 569 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 FSD1LQ9BXM9 530 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 CARD9Q9H257 536 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 THSD1Q9NS62 852 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 LRIT1Q9P2V4 623 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 RSPH14Q9UHP6 348 aa13.84□□□□□ -0.19
SEC13-204ENST00000397099 UNC13CQ8NB66 2214 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 GRID2IPA4D2P6 1211 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 OR5K4A6NMS3 321 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 B4DGG1 531 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 MPOP05164 745 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 RBP3P10745 1247 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 ITPKBP27987 946 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 RBMS1P29558 406 aaKnown RBP13.83□□□□□ -0.2
SEC13-204ENST00000397099 CD68P34810 354 aaPredicted RBP13.83□□□□□ -0.2
SEC13-204ENST00000397099 EIF2S3P41091 472 aaKnown RBP13.83□□□□□ -0.2
SEC13-204ENST00000397099 PDE1BQ01064 536 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 CTBSQ01459 385 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 COL9A2Q14055 689 aaPredicted RBP13.83□□□□□ -0.2
SEC13-204ENST00000397099 NR1D2Q14995 579 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 TBC1D25Q3MII6 688 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 ZNF438Q7Z4V0 828 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 NRROSQ86YC3 692 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 PHYKPLQ8IUZ5 450 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 CCNJLQ8IV13 435 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 ARL14Q8N4G2 192 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 SPC24Q8NBT2 197 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 WDR36Q8NI36 951 aaKnown RBP13.83□□□□□ -0.2
SEC13-204ENST00000397099 ACTL9Q8TC94 416 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 CCDC97Q96F63 343 aaPredicted RBP13.83□□□□□ -0.2
SEC13-204ENST00000397099 CRELD1Q96HD1 420 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 GBA3Q9H227 469 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 LRRN3Q9H3W5 708 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 STN1Q9H668 368 aaKnown RBP13.83□□□□□ -0.2
SEC13-204ENST00000397099 SYNDIG1Q9H7V2 258 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 TRIM39Q9HCM9 518 aa13.83□□□□□ -0.2
SEC13-204ENST00000397099 FEZ2Q9UHY8 353 aaPredicted RBP13.83□□□□□ -0.2
SEC13-204ENST00000397099 CCDC187A0A096LP49 1063 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 MACROD2A1Z1Q3 448 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 EIF4E1BA6NMX2 242 aaKnown RBP13.82□□□□□ -0.2
SEC13-204ENST00000397099 RHPN2P1A8MT19 583 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 D6RAR5 112 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 INPP4BO15327 924 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 ARHGAP6O43182 974 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 VEGFDO43915 354 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 DNAJC6O75061 913 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 SLC25A14O95258 325 aaPredicted RBP13.82□□□□□ -0.2
SEC13-204ENST00000397099 FUCA1P04066 466 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 RPLP0P05388 317 aaKnown RBP13.82□□□□□ -0.2
SEC13-204ENST00000397099 RBL1P28749 1068 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 CCKBRP32239 447 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 ACTR1BP42025 376 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 POLD2P49005 469 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 CLCNKAP51800 687 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 EIF3EP60228 445 aaKnown RBP13.82□□□□□ -0.2
SEC13-204ENST00000397099 ACTR1AP61163 376 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 GABREP78334 506 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 OTUD4Q01804 1114 aaKnown RBP13.82□□□□□ -0.2
SEC13-204ENST00000397099 CCDC173Q0VFZ6 552 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 LLGL1Q15334 1064 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 SLC1A5Q15758 541 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 KCTD16Q68DU8 428 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 DARS2Q6PI48 645 aaKnown RBP13.82□□□□□ -0.2
SEC13-204ENST00000397099 DOK6Q6PKX4 331 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 KDELC1Q6UW63 502 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 RFLNAQ6ZTI6 216 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 KDELC2Q7Z4H8 507 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 CCL4L1Q8NHW4 92 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 BRSK1Q8TDC3 778 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 VPS35Q96QK1 796 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 SMIM14Q96QK8 99 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 WDR24Q96S15 920 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 AGAP2Q99490 1192 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 HERPUD2Q9BSE4 406 aa13.82□□□□□ -0.2
SEC13-204ENST00000397099 FRMD8P1Q9BZ68 369 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms