RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CYP4V2Q6ZWL3 525 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-204ENST00000391814 CIR1Q86X95 450 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-204ENST00000391814 ZNF670Q9BS34 389 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 RTFDC1Q9BY42 306 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-204ENST00000391814 ZNF69Q9UC07 566 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 TIMM22Q9Y584 194 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 ITGB1P05556 798 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 S100A2P29034 98 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 BCL2L1Q07817 233 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 GRSF1Q12849 480 aaKnown RBP eCLIP16.09■□□□□ 0.17
SHANK1-204ENST00000391814 ACAP2Q15057 778 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 COLEC11Q9BWP8 271 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 MED11Q9P086 117 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 PCDHGC3Q9UN70 934 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 ARF3P61204 181 aaPredicted RBP16.09■□□□□ 0.17
SHANK1-204ENST00000391814 ARF1P84077 181 aaKnown RBP16.09■□□□□ 0.17
SHANK1-204ENST00000391814 CPSF6Q16630 551 aaKnown RBP eCLIP16.09■□□□□ 0.17
SHANK1-204ENST00000391814 ARMC12Q5T9G4 340 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 CPT1BQ92523 772 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 PRDM16Q9HAZ2 1276 aa16.09■□□□□ 0.17
SHANK1-204ENST00000391814 TULP3O75386 442 aa16.08■□□□□ 0.17
SHANK1-204ENST00000391814 POU2F1P14859 743 aa16.08■□□□□ 0.17
SHANK1-204ENST00000391814 ATN1P54259 1190 aaPredicted RBP16.08■□□□□ 0.17
SHANK1-204ENST00000391814 AP1S2P56377 157 aa16.08■□□□□ 0.17
SHANK1-204ENST00000391814 BTN3A2P78410 334 aa16.08■□□□□ 0.17
SHANK1-204ENST00000391814 TAF1CQ15572 869 aaPredicted RBP16.08■□□□□ 0.17
SHANK1-204ENST00000391814 CCDC28AQ8IWP9 274 aa16.08■□□□□ 0.17
SHANK1-204ENST00000391814 DNAJC19Q96DA6 116 aa16.08■□□□□ 0.17
SHANK1-204ENST00000391814 SERPINB11Q96P15 392 aa16.08■□□□□ 0.17
SHANK1-204ENST00000391814 ZNF607Q96SK3 696 aa16.08■□□□□ 0.17
SHANK1-204ENST00000391814 TMEM109Q9BVC6 243 aa16.08■□□□□ 0.17
SHANK1-204ENST00000391814 ELAC1Q9H777 363 aaKnown RBP16.08■□□□□ 0.17
SHANK1-204ENST00000391814 ST14Q9Y5Y6 855 aa16.08■□□□□ 0.17
SHANK1-204ENST00000391814 ABHD14A-ACY1A0A1B0GW23 586 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 IPO13O94829 963 aaKnown RBP16.08■□□□□ 0.16
SHANK1-204ENST00000391814 SLC25A27O95847 323 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 NAT16Q8N8M0 369 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 C12orf43Q96C57 262 aaKnown RBP16.08■□□□□ 0.16
SHANK1-204ENST00000391814 DHX15O43143 795 aaKnown RBP16.08■□□□□ 0.16
SHANK1-204ENST00000391814 ACADLP28330 430 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 ECM1Q16610 540 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 OAFQ86UD1 273 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 ZNF366Q8N895 744 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 HDAC10Q969S8 669 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 HIPK3Q9H422 1215 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 FRMPD1Q5SYB0 1578 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 PRODHO43272 600 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 MTHFD1P11586 935 aaKnown RBP16.08■□□□□ 0.16
SHANK1-204ENST00000391814 CCNCP24863 283 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 ARFIP1P53367 373 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 AP3S2P59780 193 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 HSPA14Q0VDF9 509 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 TGFBIQ15582 683 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 INSCQ1MX18 579 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 HECTD3Q5T447 861 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 RBM12BQ8IXT5 1001 aaKnown RBP16.08■□□□□ 0.16
SHANK1-204ENST00000391814 ASB8Q9H765 288 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.08■□□□□ 0.16
SHANK1-204ENST00000391814 PCDH8O95206 1070 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 POMCP01189 267 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 PIRTP0C851 137 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 SLC2A2P11168 524 aaPredicted RBP16.08■□□□□ 0.16
SHANK1-204ENST00000391814 ALDH3A2P51648 485 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 GRB14Q14449 540 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 WNT8BQ93098 351 aa16.08■□□□□ 0.16
SHANK1-204ENST00000391814 SSU72Q9NP77 194 aaKnown RBP16.08■□□□□ 0.16
SHANK1-204ENST00000391814 SPATA31A3Q5VYP0 1347 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 GPR182O15218 404 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 MNDAP41218 407 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 MAXP61244 160 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 HECTD2Q5U5R9 776 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 PPP1R13LQ8WUF5 828 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 GLT1D1Q96MS3 346 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 PGLYRP2Q96PD5 576 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 OSMRQ99650 979 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 TAS2R1Q9NYW7 299 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 AASSQ9UDR5 926 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 NCKAP1Q9Y2A7 1128 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 EI24O14681 340 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 NOS2P35228 1153 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 ARL13AQ5H913 290 aaPredicted RBP16.07■□□□□ 0.16
SHANK1-204ENST00000391814 HGSNATQ68CP4 663 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 USP30Q70CQ3 517 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 ZNF431Q8TF32 576 aaPredicted RBP16.07■□□□□ 0.16
SHANK1-204ENST00000391814 ZDHHC6Q9H6R6 413 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 ZNF234Q14588 700 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 PTPRNQ16849 979 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 VSTM1Q6UX27 236 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 ASB18Q6ZVZ8 466 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 GALNTL5Q7Z4T8 443 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 BANPQ8N9N5 519 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 LINC00116Q8NCU8 138 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 MKLN1Q9UL63 735 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 A0A075B6Q4 140 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 PLIN3O60664 434 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 IFNA6P05013 189 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 ACTR3P61158 418 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 SLITRK4Q8IW52 837 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 CRAMP1Q96RY5 1269 aa16.07■□□□□ 0.16
SHANK1-204ENST00000391814 GAD1Q99259 594 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms