RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 LSMEM1Q8N8F7 131 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 TTC16Q8NEE8 873 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 PSMA8Q8TAA3 256 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 FKBP10Q96AY3 582 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 CHID1Q9BWS9 393 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 CYP3A43Q9HB55 503 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 SNX15Q9NRS6 342 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 DDX28Q9NUL7 540 aaKnown RBP12.11□□□□□ -0.47
C9orf3-203ENST00000375315 BAG5Q9UL15 447 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 CAB39Q9Y376 341 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-203ENST00000375315 SPEF1Q9Y4P9 236 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 MTRF1O75570 445 aaKnown RBP12.11□□□□□ -0.47
C9orf3-203ENST00000375315 RBL1P28749 1068 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 SKIV2LQ15477 1246 aaKnown RBP12.11□□□□□ -0.47
C9orf3-203ENST00000375315 SMU1Q2TAY7 513 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 SV2CQ496J9 727 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 STEAP4Q687X5 459 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 LRRC8DQ7L1W4 858 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 ARFGAP1Q8N6T3 406 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 POC5Q8NA72 575 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 LEMD2Q8NC56 503 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 OR6Q1Q8NGQ2 317 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 FIG4Q92562 907 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 DEPDC7Q96QD5 511 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 CLPBQ9H078 707 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 CCDC177Q9NQR7 707 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-203ENST00000375315 GMIPQ9P107 970 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 MYO9BQ13459 2157 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 MOXD2PA6NHM9 499 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 H0YAE9 185 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 AP3B1O00203 1094 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 DNAJB5O75953 348 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 TPSB2P20231 275 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 ATP6V1B2P21281 511 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 GP5P40197 560 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 C19orf57Q0VDD7 668 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 TPSAB1Q15661 275 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 HIST2H2ACQ16777 129 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-203ENST00000375315 CCDC14Q49A88 953 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 CDONQ4KMG0 1287 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 ARL13AQ5H913 290 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-203ENST00000375315 KIAA0319Q5VV43 1072 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 NEK5Q6P3R8 708 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 FKBP9P1Q75LS8 142 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 CCDC103Q8IW40 242 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 SIMC1Q8NDZ2 872 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 GRPEL2Q8TAA5 225 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 MAGEE2Q8TD90 523 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-203ENST00000375315 CHAC2Q8WUX2 184 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 FAM193BQ96PV7 902 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-203ENST00000375315 ADNPQ9H2P0 1102 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 RUBCNLQ9H714 662 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 ABCB10Q9NRK6 738 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 NUDT5Q9UKK9 219 aa12.11□□□□□ -0.47
C9orf3-203ENST00000375315 A0A0U1RQF3 1178 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 CDK2AP1O14519 115 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 MRASO14807 208 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 MTSS1O43312 755 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 ELK4P28324 431 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 CDH6P55285 790 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 TLE2Q04725 743 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 STILQ15468 1287 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 RBM48Q5RL73 367 aaKnown RBP12.1□□□□□ -0.47
C9orf3-203ENST00000375315 GLB1LQ6UWU2 654 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 SLC16A12Q6ZSM3 486 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 ZNF534Q76KX8 674 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 XYLT1Q86Y38 959 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 CCDC28AQ8IWP9 274 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 REM2Q8IYK8 340 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-203ENST00000375315 GPR152Q8TDT2 470 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 RXFP2Q8WXD0 754 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 BCL7BQ9BQE9 202 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 DGCR6LQ9BY27 220 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 TMEM181Q9P2C4 612 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 ANK1P16157 1881 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 WDR27A2RRH5 827 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 TRPC5OSA6NMA1 111 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 B4GAT1O43505 415 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 NBNO60934 754 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 DDHD2O94830 711 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 PFKMP08237 780 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 HTR1BP28222 390 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 ALDH7A1P49419 539 aaKnown RBP12.1□□□□□ -0.47
C9orf3-203ENST00000375315 PPP2R2BQ00005 443 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 FCHO2Q0JRZ9 810 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 CMC1Q7Z7K0 106 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 SPARTQ8N0X7 666 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 LRRC52Q8N7C0 313 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 B3GALNT2Q8NCR0 500 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 NMRAL1Q9HBL8 299 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 OXSMQ9NWU1 459 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 ADAM28Q9UKQ2 775 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 SNX5Q9Y5X3 404 aa12.1□□□□□ -0.47
C9orf3-203ENST00000375315 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-203ENST00000375315 UPK1BO75841 260 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 CABYRO75952 493 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 SEC24AO95486 1093 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 APOA4P06727 396 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 KCNE1P15382 129 aa12.09□□□□□ -0.47
C9orf3-203ENST00000375315 CST5P28325 142 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms