RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 RAD9BQ6WBX8 426 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 ATG9AQ7Z3C6 839 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 LDB1Q86U70 411 aaPredicted RBP1.65□□□□□ -2.14
BRCA1-202ENST00000354071 HOOK3Q86VS8 718 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 CIR1Q86X95 450 aaPredicted RBP1.65□□□□□ -2.14
BRCA1-202ENST00000354071 PEX5LQ8IYB4 626 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 NHLRC2Q8NBF2 726 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 LRRC59Q96AG4 307 aaKnown RBP1.65□□□□□ -2.14
BRCA1-202ENST00000354071 PDLIM5Q96HC4 596 aaKnown RBP1.65□□□□□ -2.14
BRCA1-202ENST00000354071 CRAMP1Q96RY5 1269 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 MARCH4Q9P2E8 410 aaPredicted RBP1.65□□□□□ -2.14
BRCA1-202ENST00000354071 UTS2RQ9UKP6 389 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 KNSTRNQ9Y448 316 aa1.65□□□□□ -2.14
BRCA1-202ENST00000354071 TIAM1Q13009 1591 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 TRBV5-7A0A0A0MS05 114 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 MAGEB17A8MXT2 336 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 DIRC3C9JPN6 131 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 J3KR12 359 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 PEX1O43933 1283 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 GUCA1CO95843 209 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 CDH2P19022 906 aaPredicted RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 SCP2P22307 547 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 IL15P40933 162 aaPredicted RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 CAPZA1P52907 286 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 BAATQ14032 418 aaPredicted RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 LARS2Q15031 903 aaKnown RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 SNAPC1Q16533 368 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 ODF3L2Q3SX64 289 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 GLE1Q53GS7 698 aaKnown RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 COLEC12Q5KU26 742 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 NSUN5P2Q63ZY6 315 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 KIAA0895LQ68EN5 471 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 KRT80Q6KB66 452 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM71Q6P5X7 295 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 MOXD1Q6UVY6 613 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 B3GNT6Q6ZMB0 384 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 RBM44Q6ZP01 1051 aaKnown RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 DPPA4Q7L190 304 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 CHST3Q7LGC8 479 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 SLC9B2Q86UD5 537 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 IGFN1Q86VF2 1251 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 NLRP14Q86W24 1093 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 PAQR4Q8N4S7 273 aaPredicted RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 TMCO5AQ8N6Q1 288 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 RP9Q8TA86 221 aaKnown RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 OCC1Q8TAD7 63 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 CCDC47Q96A33 483 aaKnown RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 PGAM5Q96HS1 289 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 EFHD1Q9BUP0 239 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 ALG8Q9BVK2 526 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 ESRP2Q9H6T0 727 aaKnown RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 IARS2Q9NSE4 1012 aaKnown RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 SERGEFQ9UGK8 458 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 LTBP1Q14766 1721 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 KRTAP23-1A1A580 65 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 A6NNC1 897 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 KDM4EB2RXH2 506 aaPredicted RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 OGG1O15527 345 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 GCATO75600 419 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 PRDM1O75626 825 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 FYNP06241 537 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 FAM200BP0CF97 657 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF182P17025 639 aaPredicted RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 ERCC2P18074 760 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 RPA1P27694 616 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 SERPINB6P35237 376 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF131P52739 623 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 GCNT1Q02742 428 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 PPATQ06203 517 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 CDSNQ15517 529 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 PTPN14Q15678 1187 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 TYSND1Q2T9J0 566 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 VWC2Q2TAL6 325 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 LRCH2Q5VUJ6 765 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 TCERG1LQ5VWI1 586 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 PODNL1Q6PEZ8 512 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 CPLX2Q6PUV4 134 aaKnown RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 NHLRC1Q6VVB1 395 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 ZBTB49Q6ZSB9 765 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 KCTD9Q7L273 389 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 CCDC186Q7Z3E2 898 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 MAML2Q8IZL2 1156 aaPredicted RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 GUF1Q8N442 669 aaKnown RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 OR2AK2Q8NG84 335 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 SETD6Q8TBK2 473 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 RITA1Q96K30 269 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 NTPCRQ9BSD7 190 aaKnown RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 NUP85Q9BW27 656 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 TRIM2Q9C040 744 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 P2RY12Q9H244 342 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 ADPRHL2Q9NX46 363 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 LARSQ9P2J5 1176 aaKnown RBP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 RHCGQ9UBD6 479 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 RAP2CQ9Y3L5 183 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 CLDN16Q9Y5I7 305 aa1.65□□□□□ -2.15
BRCA1-202ENST00000354071 UTP18Q9Y5J1 556 aaKnown RBP eCLIP1.65□□□□□ -2.15
BRCA1-202ENST00000354071 A0A1W2PRG0 241 aa1.64□□□□□ -2.15
BRCA1-202ENST00000354071 RGSL1A5PLK6 1076 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms