RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SQLEQ14534 574 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 PTPRCAPQ14761 206 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 SKIV2LQ15477 1246 aaKnown RBP9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 AGKQ53H12 422 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 ZMAT1Q5H9K5 638 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 VARS2Q5ST30 1063 aaKnown RBP9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 C1orf220Q5T0J3 134 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 CACHD1Q5VU97 1274 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 LAMTOR1Q6IAA8 161 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 TRMT1LQ7Z2T5 733 aaKnown RBP9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 FBXO11Q86XK2 927 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 HMGCLL1Q8TB92 370 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 VTI1AQ96AJ9 217 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 RNF31Q96EP0 1072 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 OPALINQ96PE5 141 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 NODALQ96S42 347 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 UNC93B1Q9H1C4 597 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 DHX35Q9H5Z1 703 aaKnown RBP9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 SPAG4Q9NPE6 437 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 DCP1AQ9NPI6 582 aaPredicted RBP9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 KMT5AQ9NQR1 393 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 COL20A1Q9P218 1284 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 ERVK-18Q9QC07 812 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 ZDHHC2Q9UIJ5 367 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 LRFN2Q9ULH4 789 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 TMEM5Q9Y2B1 443 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 TOGARAM1Q9Y4F4 1720 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 FER1L6Q2WGJ9 1857 aa9.62□□□□□ -0.87
PTCHD4-201ENST00000339488 CLRN2A0PK11 232 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 OLFM2O95897 454 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 NTRK1P04629 796 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 APRTP07741 180 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 STMN1P16949 149 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 PCMT1P22061 227 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 RFX2P48378 723 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 NUMBP49757 651 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 MPP1Q00013 466 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 GRIK2Q13002 908 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 TRAF3Q13114 568 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 MAMLD1Q13495 774 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 CYP51A1Q16850 503 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 ZNF404Q494X3 552 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 ABI3BPQ7Z7G0 1075 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 GLCCI1Q86VQ1 547 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 IFNL2Q8IZJ0 200 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 FNDC5Q8NAU1 212 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 CHDHQ8NE62 594 aaPredicted RBP9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 SYTL5Q8TDW5 730 aaPredicted RBP9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 LGALS12Q96DT0 336 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 CENPNQ96H22 339 aaPredicted RBP9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 RBM14Q96PK6 669 aaKnown RBP9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 TRNT1Q96Q11 434 aaKnown RBP9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 ZNF300Q96RE9 604 aaPredicted RBP9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 TNFRSF10DQ9UBN6 386 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 USP22Q9UPT9 525 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 CCDC182A6NF36 153 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 GRID2O43424 1007 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 CDK14O94921 469 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 GPC1P35052 558 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 HSD17B2P37059 387 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 TPMTP51580 245 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 VAMP7P51809 220 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 BLVRAP53004 296 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 DEFA1P59665 94 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 DEFA3P59666 94 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 HOXC5Q00444 222 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 OGDHQ02218 1023 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 ZNF252P-AS1Q0IIN9 211 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 MAPRE2Q15555 327 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 AANATQ16613 207 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 TRIM60Q495X7 471 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 IQCCQ4KMZ1 466 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 LAIR2Q6ISS4 152 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 CES5AQ6NT32 575 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 LRFN4Q6PJG9 635 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 SPRED1Q7Z699 444 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 PM20D2Q8IYS1 436 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 PACRGLQ8N7B6 248 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 OR6P1Q8NGX9 317 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 PYCR2Q96C36 320 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 FAM129BQ96TA1 746 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 VAT1Q99536 393 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 GATA5Q9BWX5 397 aaPredicted RBP9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 ASB7Q9H672 318 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 QTRT2Q9H974 415 aaKnown RBP9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 CAB39LQ9H9S4 337 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 SMURF2Q9HAU4 748 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 XPNPEP3Q9NQH7 507 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 CCM2LQ9NUG4 571 aaPredicted RBP9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 TMEM181Q9P2C4 612 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 AGO1Q9UL18 857 aaKnown RBP9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 DRG1Q9Y295 367 aaKnown RBP9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 TNS2Q63HR2 1409 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 HACD1B0YJ81 288 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 F8W810 466 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 YKT6O15498 198 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 GLRA3O75311 464 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 PLATP00750 562 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 PCSK2P16519 638 aa9.61□□□□□ -0.87
PTCHD4-201ENST00000339488 FGFR2P21802 821 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms