RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 OR4L1Q8NH43 312 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 LRRC58Q96CX6 371 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 CENPNQ96H22 339 aaPredicted RBP19.79■□□□□ 0.76
SOX2-201ENST00000325404 MYRFLQ96LU7 910 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 SLC39A3Q9BRY0 314 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 OCEL1Q9H607 264 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 CAAP1Q9H8G2 361 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 PCDHA9Q9Y5H5 950 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 A0A087WXM4 84 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 KANSL1LA0AUZ9 987 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 CKMT2P17540 419 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 PSMA3P25788 255 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 MAGEA11P43364 429 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 VPS26BQ4G0F5 336 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 FBXL22Q6P050 247 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 GLB1LQ6UWU2 654 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 SPRED1Q7Z699 444 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 PTRH1Q86Y79 214 aaKnown RBP19.79■□□□□ 0.76
SOX2-201ENST00000325404 SH3RF2Q8TEC5 729 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 DNAJC1Q96KC8 554 aaKnown RBP19.79■□□□□ 0.76
SOX2-201ENST00000325404 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.79■□□□□ 0.76
SOX2-201ENST00000325404 CD320Q9NPF0 282 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 CMTM6Q9NX76 183 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 MYO16Q9Y6X6 1858 aa19.79■□□□□ 0.76
SOX2-201ENST00000325404 LCHNA4D1U4 455 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 UBXN8O00124 270 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 PRAMEF11O60813 436 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 EOMESO95936 686 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 GRB7Q14451 532 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 PFKFB4Q16877 469 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 RTN4RL1Q86UN2 441 aaPredicted RBP19.78■□□□□ 0.76
SOX2-201ENST00000325404 SNX31Q8N9S9 440 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 SEMA3CQ99985 751 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 TUBB1Q9H4B7 451 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 RETREG1Q9H6L5 497 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 PFDN4Q9NQP4 134 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 TRIM17Q9Y577 477 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 GPR45Q9Y5Y3 372 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 A0A1W2PP18 115 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 TMEM189-UBE2V1I3L0A0 370 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 CCL22O00626 93 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 STX16O14662 325 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 CLASP2O75122 1294 aaKnown RBP19.78■□□□□ 0.76
SOX2-201ENST00000325404 MT-CO1P00395 513 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 SLC4A1P02730 911 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 UMPSP11172 480 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 CDK4P11802 303 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 HPCAP84074 193 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 CLCQ05315 142 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 PAPD5Q8NDF8 572 aaKnown RBP19.78■□□□□ 0.76
SOX2-201ENST00000325404 TRPV3Q8NET8 790 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 IGSF8Q969P0 613 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 SAGE1Q9NXZ1 904 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 POLG2Q9UHN1 485 aa19.78■□□□□ 0.76
SOX2-201ENST00000325404 SYCE1LA8MT33 242 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 DLGAP1O14490 977 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 IGLV3-27P01718 113 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 PCSK6P29122 969 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 RPS6KA2Q15349 733 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 ATP6AP1Q15904 470 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 SPNS2Q8IVW8 549 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 COLGALT2Q8IYK4 626 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 ADGRG5Q8IZF4 528 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 TUBGCP3Q96CW5 907 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 CEP350Q5VT06 3117 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 A0A1B0GTW7 788 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 H3BMM5 538 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 KLK8O60259 260 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 SIX3O95343 332 aaPredicted RBP19.77■□□□□ 0.76
SOX2-201ENST00000325404 NPPAP01160 153 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 RPS17P08708 135 aaKnown RBP19.77■□□□□ 0.76
SOX2-201ENST00000325404 GFAPP14136 432 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 HGFP14210 728 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 CD9P21926 228 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 CCT8P50990 548 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 FOXA1P55317 472 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 HTRA3P83110 453 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 SEMA3AQ14563 771 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 PITRM1Q5JRX3 1037 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 ANKS6Q68DC2 871 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 DHRS4L2Q6PKH6 230 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 LRRC8DQ7L1W4 858 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 DDIASQ8IXT1 998 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 PNPLA1Q8N8W4 532 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 LINC01599Q8WXQ3 324 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 DDX18Q9NVP1 670 aaKnown RBP19.77■□□□□ 0.76
SOX2-201ENST00000325404 ABI2Q9NYB9 513 aaPredicted RBP19.77■□□□□ 0.76
SOX2-201ENST00000325404 ARL5AQ9Y689 179 aa19.77■□□□□ 0.76
SOX2-201ENST00000325404 MRPL42Q9Y6G3 142 aaKnown RBP19.77■□□□□ 0.76
SOX2-201ENST00000325404 GRXCR2A6NFK2 248 aa19.76■□□□□ 0.75
SOX2-201ENST00000325404 RING1Q06587 406 aa19.76■□□□□ 0.75
SOX2-201ENST00000325404 GEN1Q17RS7 908 aa19.76■□□□□ 0.75
SOX2-201ENST00000325404 TMTC4Q5T4D3 741 aa19.76■□□□□ 0.75
SOX2-201ENST00000325404 TXNDC11Q6PKC3 985 aa19.76■□□□□ 0.75
SOX2-201ENST00000325404 RYBPQ8N488 228 aaPredicted RBP19.76■□□□□ 0.75
SOX2-201ENST00000325404 FBXO39Q8N4B4 442 aa19.76■□□□□ 0.75
SOX2-201ENST00000325404 CBR4Q8N4T8 237 aa19.76■□□□□ 0.75
SOX2-201ENST00000325404 FAM47BQ8NA70 645 aa19.76■□□□□ 0.75
SOX2-201ENST00000325404 LRCH3Q96II8 777 aa19.76■□□□□ 0.75
SOX2-201ENST00000325404 SEZ6LQ9BYH1 1024 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms