RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 TRIM39Q9HCM9 518 aa18.78■□□□□ 0.6
MALSU1-201ENST00000287543 ZNHIT2Q9UHR6 403 aa18.78■□□□□ 0.6
MALSU1-201ENST00000287543 AAR2Q9Y312 384 aaKnown RBP18.78■□□□□ 0.6
MALSU1-201ENST00000287543 PCDHGA8Q9Y5G5 932 aa18.78■□□□□ 0.6
MALSU1-201ENST00000287543 ENTPD2Q9Y5L3 495 aa18.78■□□□□ 0.6
MALSU1-201ENST00000287543 RHPN2P1A8MT19 583 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 FADS2P1A8MWK0 482 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 PPFIA2O75334 1257 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 SLC25A14O95258 325 aaPredicted RBP18.77■□□□□ 0.6
MALSU1-201ENST00000287543 PIRTP0C851 137 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 RBP3P10745 1247 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 PYGMP11217 842 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 AK4P27144 223 aaPredicted RBP18.77■□□□□ 0.6
MALSU1-201ENST00000287543 RBMS1P29558 406 aaKnown RBP18.77■□□□□ 0.6
MALSU1-201ENST00000287543 GPR3P46089 330 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 GABREP78334 506 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 CCL7P80098 99 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 DARS2Q6PI48 645 aaKnown RBP18.77■□□□□ 0.6
MALSU1-201ENST00000287543 MARK2Q7KZI7 788 aaKnown RBP18.77■□□□□ 0.6
MALSU1-201ENST00000287543 TRIM74Q86UV6 250 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 CCDC112Q8NEF3 446 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 WDR36Q8NI36 951 aaKnown RBP18.77■□□□□ 0.6
MALSU1-201ENST00000287543 ALG3Q92685 438 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 EID2BQ96D98 161 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 PLEKHG4BQ96PX9 1271 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 FSD1LQ9BXM9 530 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 GBA3Q9H227 469 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 RNF215Q9Y6U7 377 aa18.77■□□□□ 0.6
MALSU1-201ENST00000287543 ARID1BQ8NFD5 2236 aaPredicted RBP18.77■□□□□ 0.59
MALSU1-201ENST00000287543 TP53BP1Q12888 1972 aaPredicted RBP18.76■□□□□ 0.59
MALSU1-201ENST00000287543 CCDC187A0A096LP49 1063 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 KRT86O43790 486 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 DNAJC6O75061 913 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 MPOP05164 745 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 SLC2A4P14672 509 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 SLC1A5Q15758 541 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 SIRPB2Q5JXA9 342 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 ZNF438Q7Z4V0 828 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 PHYKPLQ8IUZ5 450 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 ARL14Q8N4G2 192 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 GPR26Q8NDV2 337 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 IPMKQ8NFU5 416 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 GLYATL1Q969I3 302 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 TMEM159Q96B96 161 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 ATXN7L3BQ96GX2 97 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 LIN37Q96GY3 246 aaPredicted RBP18.76■□□□□ 0.59
MALSU1-201ENST00000287543 MRGPRX2Q96LB1 330 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 DESI2Q9BSY9 194 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 THSD1Q9NS62 852 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 RABGEF1Q9UJ41 708 aa18.76■□□□□ 0.59
MALSU1-201ENST00000287543 A0A1W2PQM1 296 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 D6RAR5 112 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 KCNN4O15554 427 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 ARHGAP6O43182 974 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 VEGFDO43915 354 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 NUAK1O60285 661 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 ECEL1O95672 775 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 SLC4A1P02730 911 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 ATP1A1P05023 1023 aaKnown RBP18.75■□□□□ 0.59
MALSU1-201ENST00000287543 BPIP17213 487 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 CCKBRP32239 447 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 EIF2S3P41091 472 aaKnown RBP18.75■□□□□ 0.59
MALSU1-201ENST00000287543 INHBCP55103 352 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 NR1D2Q14995 579 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 ALS2CLQ60I27 953 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 SPRED1Q7Z699 444 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 SLC25A41Q8N5S1 370 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 Q8N9G6 341 aaPredicted RBP18.75■□□□□ 0.59
MALSU1-201ENST00000287543 AVL9Q8NBF6 648 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 PTCD2Q8WV60 388 aaKnown RBP18.75■□□□□ 0.59
MALSU1-201ENST00000287543 OXNAD1Q96HP4 312 aaPredicted RBP18.75■□□□□ 0.59
MALSU1-201ENST00000287543 VPS35Q96QK1 796 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 STN1Q9H668 368 aaKnown RBP18.75■□□□□ 0.59
MALSU1-201ENST00000287543 PKP3Q9Y446 797 aa18.75■□□□□ 0.59
MALSU1-201ENST00000287543 OAS3Q9Y6K5 1087 aaKnown RBP18.75■□□□□ 0.59
MALSU1-201ENST00000287543 MAP1BP46821 2468 aaKnown RBP18.75■□□□□ 0.59
MALSU1-201ENST00000287543 GRID2O43424 1007 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 CLCNKAP51800 687 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 ANKRD20A2Q5SQ80 823 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 FAM182AQ5T1J6 154 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 ANKRD20A1Q5TYW2 823 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 ANKRD20A3Q5VUR7 823 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 NAGSQ8N159 534 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 ZNF248Q8NDW4 579 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 BRSK1Q8TDC3 778 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 CCDC97Q96F63 343 aaPredicted RBP18.74■□□□□ 0.59
MALSU1-201ENST00000287543 HES6Q96HZ4 224 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 SPATA13Q96N96 652 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 SLC46A1Q96NT5 459 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 DCBLD2Q96PD2 775 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 DPYSL5Q9BPU6 564 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 ATXN10Q9UBB4 475 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 TRIM10Q9UDY6 481 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 FEZ2Q9UHY8 353 aaPredicted RBP18.74■□□□□ 0.59
MALSU1-201ENST00000287543 LHX6Q9UPM6 363 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 SATB2Q9UPW6 733 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 SPO11Q9Y5K1 396 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 ADGRG1Q9Y653 693 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 SPEGQ15772 3267 aa18.74■□□□□ 0.59
MALSU1-201ENST00000287543 PLXNB3Q9ULL4 1909 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms