RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TNRC6BQ9UPQ9 1833 aaKnown RBP13.16□□□□□ -0.3
SLIRP-201ENST00000238688 RGSL1A5PLK6 1076 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 H3BMM5 538 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 ZNF821O75541 412 aaPredicted RBP13.15□□□□□ -0.3
SLIRP-201ENST00000238688 KLHL2O95198 593 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 S1PR4O95977 384 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 MT-CO1P00395 513 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 PROCP04070 461 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 NEFHP12036 1026 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 PMLP29590 882 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 ST8SIA6P61647 398 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 CACNG1Q06432 222 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 PUM1Q14671 1186 aaKnown RBP eCLIP13.15□□□□□ -0.35e-7■■■□□ 19
SLIRP-201ENST00000238688 CRY1Q16526 586 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 FAM83EQ2M2I3 478 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 N4BP2L1Q5TBK1 243 aaPredicted RBP13.15□□□□□ -0.3
SLIRP-201ENST00000238688 AGAP9Q5VTM2 703 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 GRAMD4Q6IC98 578 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 SPATA21Q7Z572 469 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 TBC1D1Q86TI0 1168 aaPredicted RBP13.15□□□□□ -0.3
SLIRP-201ENST00000238688 NUDCD3Q8IVD9 361 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
SLIRP-201ENST00000238688 CAMKK1Q8N5S9 505 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 UCMAQ8WVF2 138 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 STON2Q8WXE9 905 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 SCRN2Q96FV2 425 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 SEC16BQ96JE7 1060 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 KLF6Q99612 283 aaPredicted RBP13.15□□□□□ -0.3
SLIRP-201ENST00000238688 SLC13A1Q9BZW2 595 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 CCDC68Q9H2F9 335 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 SUV39H2Q9H5I1 410 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 STN1Q9H668 368 aaKnown RBP13.15□□□□□ -0.3
SLIRP-201ENST00000238688 FGFR1OP2Q9NVK5 253 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 THAP1Q9NVV9 213 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 PLK2Q9NYY3 685 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 IL17CQ9P0M4 197 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 KLHL14Q9P2G3 628 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 SLC17A7Q9P2U7 560 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 GMEB2Q9UKD1 530 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 HCN2Q9UL51 889 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 SLC39A10Q9ULF5 831 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 ERVW-1Q9UQF0 538 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 ARL2BPQ9Y2Y0 163 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 PCDHB1Q9Y5F3 818 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 ARL5AQ9Y689 179 aa13.15□□□□□ -0.3
SLIRP-201ENST00000238688 TPRP12270 2363 aaKnown RBP13.14□□□□□ -0.31
SLIRP-201ENST00000238688 MED19A0JLT2 244 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-201ENST00000238688 CCDC162PA2VCL2 907 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 FOXO6A8MYZ6 492 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 F8W8V4 182 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 SMAD6O43541 496 aaKnown RBP13.14□□□□□ -0.31
SLIRP-201ENST00000238688 LRP3O75074 770 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 GOT2P00505 430 aaKnown RBP13.14□□□□□ -0.31
SLIRP-201ENST00000238688 ESR1P03372 595 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 PYGLP06737 847 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 PDHA1P08559 390 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 RBP1P09455 135 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 CISD3P0C7P0 127 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 SLC35E2BP0CK96 405 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 GABRB3P28472 473 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 FOXN2P32314 431 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 SKIV2L2P42285 1042 aaKnown RBP13.14□□□□□ -0.31
SLIRP-201ENST00000238688 PTGER3P43115 390 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 FOXK2Q01167 660 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 CTBP1Q13363 440 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 DLG2Q15700 870 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 ATXN7L2Q5T6C5 722 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-201ENST00000238688 RAPH1Q70E73 1250 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 KBTBD6Q86V97 674 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 DENND6AQ8IWF6 608 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 OTUD6BQ8N6M0 293 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 OR4K2Q8NGD2 314 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 BHMTQ93088 406 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 TBATAQ96M53 351 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 PLEKHG4BQ96PX9 1271 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 MRPL57Q9BQC6 102 aaKnown RBP13.14□□□□□ -0.31
SLIRP-201ENST00000238688 HEPHQ9BQS7 1158 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 TSSK1BQ9BXA7 367 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 GPR63Q9BZJ6 419 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 TM6SF2Q9BZW4 377 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 ZFYVE1Q9HBF4 777 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 NMRAL1Q9HBL8 299 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 SYTL2Q9HCH5 934 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 SEMA4GQ9NTN9 838 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 DEC1Q9P2X7 70 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 COPG2Q9UBF2 871 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 EBF1Q9UH73 591 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 EVLQ9UI08 416 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-201ENST00000238688 RAB23Q9ULC3 237 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 CLEC4EQ9ULY5 219 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 PLA2G4CQ9UP65 541 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 VWA7Q9Y334 891 aa13.14□□□□□ -0.31
SLIRP-201ENST00000238688 MUC22E2RYF6 1773 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-201ENST00000238688 TMEM114B3SHH9 223 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 AXIN1O15169 862 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 KIAA0754O94854 1291 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 SERPINE1P05121 402 aa13.13□□□□□ -0.31
SLIRP-201ENST00000238688 CYP2A6P11509 494 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-201ENST00000238688 ITGALP20701 1170 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms