RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 DHX15O43143 795 aaKnown RBP11.51□□□□□ -0.57
LAMA4-201ENST00000230538 TGFB1I1O43294 461 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 ATG13O75143 517 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 BCAP31P51572 246 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 ACTR3P61158 418 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 PLPP4Q5VZY2 271 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 ZNF730Q6ZMV8 503 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 C2orf73Q8N5S3 287 aaPredicted RBP11.51□□□□□ -0.57
LAMA4-201ENST00000230538 PNPT1Q8TCS8 783 aaKnown RBP11.51□□□□□ -0.57
LAMA4-201ENST00000230538 FCRL4Q96PJ5 515 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 KCTD15Q96SI1 283 aaPredicted RBP11.51□□□□□ -0.57
LAMA4-201ENST00000230538 NOL11Q9H8H0 719 aaKnown RBP11.51□□□□□ -0.57
LAMA4-201ENST00000230538 LRTM1Q9HBL6 345 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 LRRC4CQ9HCJ2 640 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 EFR3BQ9Y2G0 817 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 COL1A2P08123 1366 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 FAM86C2PA6NEL3 165 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 FPGTO14772 594 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 CLDN11O75508 207 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 GLUD1P00367 558 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 HOXB6P17509 224 aaKnown RBP11.51□□□□□ -0.57
LAMA4-201ENST00000230538 CTSKP43235 329 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 ZNF132P52740 706 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 ARFIP1P53367 373 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 DDR1Q08345 913 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 GRB14Q14449 540 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 SMCO1Q147U7 214 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 HKDC1Q2TB90 917 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 OTOP3Q7RTS5 596 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 XYLT1Q86Y38 959 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 TRNT1Q96Q11 434 aaKnown RBP11.51□□□□□ -0.57
LAMA4-201ENST00000230538 B3GNT5Q9BYG0 378 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 PRRG4Q9BZD6 226 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 DMTF1Q9Y222 760 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 PCDHGB3Q9Y5G1 929 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 AK5Q9Y6K8 562 aa11.51□□□□□ -0.57
LAMA4-201ENST00000230538 MROH1Q8NDA8 1641 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 ARF4P18085 180 aaPredicted RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 ITGA3P26006 1051 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 OR1D2P34982 312 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 NDUFV1P49821 464 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 BNC1Q01954 994 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 DUSP4Q13115 394 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 SF1Q15637 639 aaKnown RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 BEND7Q8N7W2 519 aaPredicted RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 C12orf50Q8NA57 414 aaPredicted RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 ZNF483Q8TF39 744 aaPredicted RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 NDRG1Q92597 394 aaKnown RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 TNKS2Q9H2K2 1166 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 RNF225M0QZC1 329 aaPredicted RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 GIMD1P0DJR0 217 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 TFPIP10646 304 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 XIAPP98170 497 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 KLHL35Q6PF15 583 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 SPPL2CQ8IUH8 684 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 RASGEF1CQ8N431 466 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 ADAMTS15Q8TE58 950 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 BRINP2Q9C0B6 783 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 HBS1LQ9Y450 684 aaKnown RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 LOC110117498-PIK3R3F6TDL0 507 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 C9P02748 559 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 KELP23276 732 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 ARHGDIBP52566 201 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 GPR158Q5T848 1215 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 BEND5Q7L4P6 421 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 ANKS1BQ7Z6G8 1248 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 CPSF7Q8N684 471 aaKnown RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 PIK3C3Q8NEB9 887 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 LENG1Q96BZ8 264 aaPredicted RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 TSSK3Q96PN8 268 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 WDR12Q9GZL7 423 aaKnown RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 RASSF1Q9NS23 344 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 DNAJC11Q9NVH1 559 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 ING3Q9NXR8 418 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 GMIPQ9P107 970 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 RAPGEFL1Q9UHV5 662 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 PLLPQ9Y342 182 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 DHRS7Q9Y394 339 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 GMFGO60234 142 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 WFS1O76024 890 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 S100A9P06702 114 aaKnown RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 PRKAR2AP13861 404 aaKnown RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 TPSB2P20231 275 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 AQP1P29972 269 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 IL18R1Q13478 541 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 TPSAB1Q15661 275 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 OR4K2Q8NGD2 314 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 FAR1Q8WVX9 515 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 CSPG4P5Q96PW8 444 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 PDP1Q9P0J1 537 aaPredicted RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 SEC14L3Q9UDX4 400 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 IPO13O94829 963 aaKnown RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 GNPDA1P46926 289 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 ABATP80404 500 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 TEX44Q53QW1 395 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 CPA6Q8N4T0 437 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 ALG3Q92685 438 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 HSD17B14Q9BPX1 270 aa11.5□□□□□ -0.57
LAMA4-201ENST00000230538 WDR55Q9H6Y2 383 aaPredicted RBP11.5□□□□□ -0.57
LAMA4-201ENST00000230538 TRPS1Q9UHF7 1281 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms