RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 RAP1GAP2Q684P5 730 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 LHX8Q68G74 356 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 FAM45BPQ6NSW5 357 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 CFAP52Q8N1V2 620 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 FAM45AQ8TCE6 357 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 IMP4Q96G21 291 aaKnown RBP15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 SLC30A3Q99726 388 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 GPATCH1Q9BRR8 931 aaKnown RBP15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 SUPT3HB4E1H0 165 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 AZIN1O14977 448 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 CLASP2O75122 1294 aaKnown RBP15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 CAPN15O75808 1086 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 VARSP26640 1264 aaKnown RBP15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 CLCN5P51795 746 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 CREB5Q02930 508 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 MERTKQ12866 999 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 SLC39A12Q504Y0 691 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 GPR141Q7Z602 305 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 PHYKPLQ8IUZ5 450 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 KLHDC8BQ8IXV7 354 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 CLYBLQ8N0X4 340 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 AFAP1L2Q8N4X5 818 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 LRRC58Q96CX6 371 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 VPS50Q96JG6 964 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 NSMCE3Q96MG7 304 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 SLC25A51Q9H1U9 297 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 STARD7Q9NQZ5 370 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 CCM2LQ9NUG4 571 aaPredicted RBP15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 FAF1Q9UNN5 650 aaPredicted RBP15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 NDUFAF1Q9Y375 327 aa15.76■□□□□ 0.11
SNAPC1-201ENST00000216294 STAMBPO95630 424 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 ELK4P28324 431 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 POLR2IP36954 125 aaKnown RBP15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 KPNA2P52292 529 aaKnown RBP15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 TSNQ15631 228 aaKnown RBP15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 C18orf21Q32NC0 220 aaPredicted RBP15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 TIGD2Q4W5G0 525 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 TMEM214Q6NUQ4 689 aaKnown RBP15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 PAQR3Q6TCH7 311 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 ADGRG5Q8IZF4 528 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 ANKFN1Q8N957 763 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 SUSD3Q96L08 255 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 UHRF1Q96T88 793 aaPredicted RBP15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 SEMA3CQ99985 751 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 SP110Q9HB58 689 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 MOXD2PA6NHM9 499 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 BOLA2-SMG1P6H3BVE0 249 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 ACOX3O15254 700 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 BMP2P12643 396 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 ARL1P40616 181 aaPredicted RBP15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 GLB1LQ6UWU2 654 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 ERI1Q8IV48 349 aaKnown RBP15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 MIER2Q8N344 545 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 EFHD1Q9BUP0 239 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 AGPAT4Q9NRZ5 378 aa15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 PRG3Q9Y2Y8 225 aaPredicted RBP15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 TDRD15B5MCY1 1934 aaKnown RBP15.75■□□□□ 0.11
SNAPC1-201ENST00000216294 PTPRDP23468 1912 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 AP3B1O00203 1094 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 CD3EAPO15446 510 aaKnown RBP15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 ATXN1LP0C7T5 689 aaKnown RBP15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 SLC2A3P11169 496 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 GSK3BP49841 420 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 IST1P53990 364 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 PIGFQ07326 219 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 NFYCQ13952 458 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 FAR2Q96K12 515 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 UROC1Q96N76 676 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 ZBED2Q9BTP6 218 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 ABCC13Q9NSE7 274 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 TBC1D13Q9NVG8 400 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 ZNF225Q9UK10 706 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 GREB1Q4ZG55 1949 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 NLRC5Q86WI3 1866 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 CLOCKO15516 846 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 HSPA8P11142 646 aaKnown RBP15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 BMP1P13497 986 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 MLLT6P55198 1093 aaPredicted RBP15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 YWHAHQ04917 246 aaPredicted RBP15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 KCTD21Q4G0X4 260 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 BORAQ6PGQ7 559 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 SLC24A5Q71RS6 500 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 KIAA2013Q8IYS2 634 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 PCYOX1LQ8NBM8 494 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 OR2T11Q8NH01 316 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 NPLQ9BXD5 320 aaPredicted RBP15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 POLR1BQ9H9Y6 1135 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 THEGQ9P2T0 379 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 SLC8A2Q9UPR5 921 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 ZNF711Q9Y462 761 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 PATJQ8NI35 1801 aa15.74■□□□□ 0.11
SNAPC1-201ENST00000216294 HNRNPCP07910 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
SNAPC1-201ENST00000216294 PSMA4P25789 261 aaKnown RBP15.73■□□□□ 0.11
SNAPC1-201ENST00000216294 OR1G1P47890 313 aa15.73■□□□□ 0.11
SNAPC1-201ENST00000216294 TSPY1Q01534 308 aa15.73■□□□□ 0.11
SNAPC1-201ENST00000216294 LIPEQ05469 1076 aa15.73■□□□□ 0.11
SNAPC1-201ENST00000216294 BNIP3Q12983 259 aa15.73■□□□□ 0.11
SNAPC1-201ENST00000216294 SELPLGQ14242 412 aa15.73■□□□□ 0.11
SNAPC1-201ENST00000216294 MS4A13Q5J8X5 152 aa15.73■□□□□ 0.11
SNAPC1-201ENST00000216294 LYSMD3Q7Z3D4 306 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms