RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Cer1O55233 272 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 MutP16332 748 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ca8P28651 291 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Aqp4P55088 323 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Dnajb14Q149L6 379 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Lrrc74bQ14BP6 391 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Gata6Q61169 589 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Mppe1Q80XL7 396 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Parp9Q8CAS9 866 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ipo13Q8K0C1 963 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Cnot6Q8K3P5 557 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Tgif2lx2Q8K5B9 231 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Mtfr2Q8VED8 361 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ttc30a1Q99J38 664 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 StambpQ9CQ26 424 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Tmem114Q9D563 222 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Maged2Q9ER67 616 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Uts2Q9QZQ3 123 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Dlc1Q9R0Z9 1092 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Mcm3apQ9WUU9 1971 aa15.82■□□□□ 0.12
Trim39-203ENSMUST00000113706 Arhgef37A1IGU4 676 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 LtfP08071 707 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Kcnc1P15388 511 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Cyr61P18406 379 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ctps1P70698 591 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Fads2p1Q0VAX3 487 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ubtfl1Q3USZ2 394 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Rnf215Q5SPX3 379 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Runx3Q64131 409 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Taf1cQ6PDZ2 836 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Uhrf1Q8VDF2 782 aaKnown RBP15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Adcy4Q91WF3 1077 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ppp2r2dQ925E7 453 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Anxa13Q99JG3 317 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ndc80Q9D0F1 642 aaKnown RBP15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Med20Q9R0X0 212 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Vmn1r49Q9WUF1 310 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Skint11A7XV14 364 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Eif2b3B1AUN2 452 aaKnown RBP15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Gja1P23242 382 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Zfp956Q3UZY6 572 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 9930111J21Rik1Q5SVP0 844 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Olfr26Q7TRB7 308 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Cox14Q8BH51 57 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Mark4Q8CIP4 752 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Utp11Q9CZJ1 253 aaKnown RBP15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Fndc8Q9D2H8 321 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ifrd2Q9D8U0 441 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Olfr933Q9EQA0 308 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Sh2d3cQ9QZS8 854 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Coro1cQ9WUM4 474 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Umodl1Q5DID3 1319 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Lilra6A0A0B4J1F3 663 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 4933424G06RikA0A140LIP3 267 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Vmn2r5K7N788 911 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Gsta3P30115 221 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Alox15P39654 663 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ap1s1P61967 158 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 CtscP97821 462 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Tnks2Q3UES3 1166 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Zfp560Q3URI6 754 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Slc39a14Q75N73 489 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Serpina12Q7TMF5 413 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Yaf2Q99LW6 179 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Cyp4f13Q99N19 523 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Isca2Q9DCB8 154 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Rps6ka2Q9WUT3 733 aa15.81■□□□□ 0.12
Trim39-203ENSMUST00000113706 Tsga10ipF7A1F0 157 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Rbp1Q00915 135 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Adam2Q60718 735 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Stmnd1Q6P3A1 279 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 DcstampQ7TNJ0 470 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Gm6377Q8BHV4 303 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 MtbpQ8BJS8 894 aaKnown RBP15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Nrip1Q8CBD1 1161 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Appl1Q8K3H0 707 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Olfr273Q8VG87 317 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Cyp2g1Q9WV19 494 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Gm14401A2ARV7 303 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Olfr620E9PZ66 313 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Vmn2r14E9Q759 848 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Vmn2r85G3UW56 850 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Pknox1O70477 436 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 RxraP28700 467 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Serpina3cP29621 417 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 UcmaQ14BU0 138 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Zfp606Q7TSV0 794 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Dhx33Q80VY9 698 aaKnown RBP15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 4932411N23RikQ8C0S0 470 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Tmc7Q8C428 726 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Med17Q8VCD5 649 aaKnown RBP15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Lrrc4Q99PH1 652 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Rnft1Q9DCN7 395 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Chrnb2Q9ERK7 501 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Cmtm7Q9ESD6 167 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Kat2aQ9JHD2 830 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Jam2Q9JI59 298 aa15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 VapbQ9QY76 243 aaKnown RBP15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 Nup210Q9QY81 1886 aaKnown RBP15.8■□□□□ 0.12
Trim39-203ENSMUST00000113706 SelenovD3YXG1 328 aa15.79■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms