RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Bmp8aP34821 399 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Surf6P70279 355 aaKnown RBP9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ext2P70428 718 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 SgcgP82348 291 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ap2m1P84091 435 aaKnown RBP9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Dok6Q2MHE5 331 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Tmem120bQ3TA38 339 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Arcn1Q5XJY5 511 aaKnown RBP9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Htr1aQ64264 421 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ephx4Q6IE26 359 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 GnasQ6R0H7 1133 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 ItpkcQ7TS72 678 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Serpinb9dQ8BMT0 377 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Fam53cQ8BXQ8 393 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Unc5aQ8K1S4 898 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Olfr273Q8VG87 317 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Asb18Q8VHA6 467 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Hkdc1Q91W97 915 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Bbs2Q9CWF6 721 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Gprc5dQ9JIL6 344 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Slc4a5E9Q3M5 1116 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Top3aO70157 1003 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ccr7P47774 378 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Lefty2P57785 368 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Tgm3Q08189 693 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Akr1clQ3UXL1 322 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Alkbh8Q80Y20 664 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ppm1nQ8BGL1 404 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Rccd1Q8BTU7 377 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Zbtb49Q8BXX2 756 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Sphk1Q8CI15 382 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Olfr398Q8VFY0 314 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 LipfQ9CPP7 395 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Mxra7Q9CZH7 178 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Dusp21Q9D9D8 189 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ak1Q9R0Y5 194 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 RgrQ9Z2B3 291 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Olfr316A0A0N4SVP2 306 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Fam181aJ3QNB7 292 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Rpl26P61255 145 aaKnown RBP9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Gabrb3P63080 473 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Cct5P80316 541 aaKnown RBP9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Perm1Q149B8 807 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ankrd34bQ3UUF8 508 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Lrrc8bQ5DU41 803 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Serpina3gQ5I2A0 440 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Olfr318Q5NCD7 306 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Fzd3Q61086 666 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Sh3gl2Q62420 352 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Irf4Q64287 450 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ubp1Q811S7 540 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ccdc68Q8BVC4 333 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Sirt3Q8R104 334 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Adcy4Q91WF3 1077 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Dhrs1Q99L04 313 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Kdelc1Q9JHP7 502 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Atg2bQ80XK6 2075 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Mroh5E9PUJ8 762 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Sgo2bJ3QMK1 1167 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ripk2P58801 539 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ppp2r2aQ6P1F6 447 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 IpmkQ7TT16 396 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 CslQ80X68 466 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 FicdQ8BIX9 458 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 RalylQ8BTF8 293 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Slco6c1Q8C0X7 706 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Cfap61Q8CEL2 1252 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 WwoxQ91WL8 414 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Hyal6Q9D4E9 494 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ppil6Q9D6D8 278 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ndufv2Q9D6J6 248 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Grin3aA2AIR5 1135 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Gm6685D3YYP3 228 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Vmn1r76F8VQ63 324 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Cyp4f17G3UW78 524 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Mid1O70583 680 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 TigitP86176 249 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Pfdn6Q03958 127 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 A1bgQ19LI2 512 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Serpinb6dQ3UWK8 375 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 CilpQ66K08 1184 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Tmem270Q6UJB9 264 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 AW551984Q8BGF0 804 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Hus1Q8BQY8 280 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Man2a2Q8BRK9 1152 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Kiaa1671Q8BRV5 308 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 C1raQ8CG16 707 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Dact1Q8R4A3 778 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 VitQ8VHI5 650 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Nipal2Q91WC7 383 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Cyp4f16Q99N17 524 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Snx7Q9CY18 387 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Klhdc8bQ9D2D9 354 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Cyp2g1Q9WV19 494 aa9.88□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 TectaO08523 2155 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Igkv6-29A0A0G2JEI6 115 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Igkv12-46A0A140T8P6 115 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Gm28729A0A1B0GSW2 409 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 A0A1Y7VP24 259 aa9.87□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Zfp788E9Q980 884 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms