RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Oas1dQ8VI95 361 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Basp1Q91XV3 226 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Tfap2dQ91ZK0 452 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Glod4Q9CPV4 298 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Carm1Q9WVG6 608 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 ThadaA8C756 1938 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Dock1Q8BUR4 1865 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ccdc194A0A140LIT1 234 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ssxb6A2BI74 170 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 1700011I03RikE9PYL8 271 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Apoa4P06728 395 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 JunbP09450 344 aaKnown RBP13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ptpn5P54830 541 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ufm1P61961 85 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 TgfbiP82198 683 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Kcnab3P97382 249 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 MylpfP97457 169 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Apba2P98084 750 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Trim40Q3UWA4 246 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Q5EBG8 199 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Olfr325Q5NCD2 326 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Itga2Q62469 1178 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Tbc1d12Q6A039 696 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Rundc3bQ6PDC0 408 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 FicdQ8BIX9 458 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 DrgxQ8BYH0 263 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Hid1Q8R1F6 788 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ero1bQ8R2E9 467 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Unc93b1Q8VCW4 598 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Lims2Q91XD2 341 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 AdprmQ99KS6 340 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ddit4Q9D3F7 229 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gid8Q9D7M1 228 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Actl7aQ9QY84 440 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Bcl10Q9Z0H7 233 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gm4869A0A1B0GSG7 984 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Rhbdl2A2AGA4 302 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Olfr1023A2ASU6 311 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Sult2a6B2RVI8 285 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Arfip1G5E8V9 373 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Psma3O70435 255 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Clec2lP0C7M9 211 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Trappc9Q3U0M1 1148 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Cmpk2Q3U5Q7 447 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Zmat1Q3V0C1 714 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Smarcd1Q61466 515 aaKnown RBP13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Crtc1Q68ED7 630 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 SyncripQ7TMK9 623 aaKnown RBP13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Olfr1252Q7TQZ2 314 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Arhgap11aQ80Y19 987 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ebf4Q8K4J2 599 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Zcchc9Q8R1J3 271 aaKnown RBP13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Cd209eQ91ZW7 208 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Slc35a5Q921R7 437 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Prpsap1Q9D0M1 356 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Tmem53Q9D0Z3 276 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ndst3Q9EQH7 873 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 D7h11orf16Q9JJR6 402 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Arl10Q9QXJ4 243 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Plod2Q9R0B9 737 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 SqorQ9R112 450 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 PrebQ9WUQ2 417 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ank3G5E8K5 1961 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Myo16Q5DU14 1919 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Olfr726E9Q8X3 321 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Dpep1P31428 410 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 StacP97306 403 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Olfr725Q05A45 321 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Pacs2Q3V3Q7 862 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Zfp78Q5U406 512 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Adgre1Q61549 931 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Krt72Q6IME9 520 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Naaladl1Q7M758 745 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Zfp418Q8BFS8 652 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Castor2Q8CAB8 329 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 BicralQ8CHH5 1074 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Micu1Q8VCX5 477 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Fbxo21Q8VDH1 627 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Lactb2Q99KR3 288 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 CutalQ9D1U5 156 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Dhx34Q9DBV3 1145 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Smad9Q9JIW5 430 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Usp34Q6ZQ93 3582 aa13.37□□□□□ -0.27
Nup88-201ENSMUST00000035283 Mcf2A2AEU1 1111 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Kctd18E0CZ26 429 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Speer4cG3UXD1 256 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gm10354K7N6A0 256 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Lrrc23O35125 340 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 EgfP01132 1217 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Mtnd4P03911 459 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ppm1hQ3UYC0 513 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Mrm3Q5ND52 418 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ntan1Q64311 310 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gm7247Q6UY52 187 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Arl5aQ80ZU0 179 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Fut11Q8BHC9 489 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Smarcal1Q8BJL0 910 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Znf451Q8C0P7 1056 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ifi205aQ8CGE8 404 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Syne4Q8CII8 388 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms