RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 ZNF563Q8TA94 476 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 ACTL9Q8TC94 416 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 C7orf43Q8WVR3 580 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 VCPIP1Q96JH7 1222 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 MARK4Q96L34 752 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 QPCTLQ9NXS2 382 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 GRXCR2A6NFK2 248 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 HDAC3O15379 428 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 TFPIP10646 304 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 C1QBPQ07021 282 aaKnown RBP9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 IL18R1Q13478 541 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 RAB39AQ14964 217 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 USP43Q70EL4 1123 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 ZC3H7AQ8IWR0 971 aaKnown RBP9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 RDH11Q8TC12 318 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 PKP2Q99959 881 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 ZNF518BQ9C0D4 1074 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 MRTO4Q9UKD2 239 aaKnown RBP9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 ZNF214Q9UL59 606 aaPredicted RBP9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 NR2E1Q9Y466 385 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 TARBP1Q13395 1621 aaKnown RBP9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 VILLO15195 856 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 FAM189A1O60320 539 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 PIGNO95427 931 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 HOXC6P09630 235 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 GLDCP23378 1020 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 JAM2P57087 298 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 RAPSNQ13702 412 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 RFX4Q33E94 735 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 FOXB2Q5VYV0 432 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 MZT2AQ6P582 158 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 SLC27A1Q6PCB7 646 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 METTL7BQ6UX53 244 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 ANKS1BQ7Z6G8 1248 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 AADATQ8N5Z0 425 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 SLC15A4Q8N697 577 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 RXFP2Q8WXD0 754 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 TOP1MTQ969P6 601 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 FAM126AQ9BYI3 521 aaPredicted RBP9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 SPATC1LQ9H0A9 340 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 FARSBQ9NSD9 589 aaKnown RBP9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 PCDHGC3Q9UN70 934 aa9.83□□□□□ -0.84
SPTAN1-228ENST00000635853 H0Y858 1186 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 I3L521 148 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 CACNB4O00305 520 aaPredicted RBP9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 TBL1XO60907 577 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 CSDE1O75534 798 aaKnown RBP9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 MSX2P35548 267 aaPredicted RBP9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 POLD2P49005 469 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 CDH17Q12864 832 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 GRB14Q14449 540 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 TNFAIP8L3Q5GJ75 292 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 KIAA0408Q6ZU52 694 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 LPGAT1Q92604 370 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 TBATAQ96M53 351 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 JSRP1Q96MG2 331 aaPredicted RBP9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 CCDC106Q9BWC9 280 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 CEP41Q9BYV8 373 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 SLC39A8Q9C0K1 460 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 COMMD9Q9P000 198 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 GMIPQ9P107 970 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 BBIP1A8MTZ0 92 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 KHDRBS3O75525 346 aaKnown RBP9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 DDNO94850 711 aaPredicted RBP9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 CCNDBP1O95273 360 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 MT-CO1P00395 513 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 CCNCP24863 283 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 ITGA3P26006 1051 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 SLC7A1P30825 629 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 GRM2Q14416 872 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 KCNMB4Q86W47 210 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 DNERQ8NFT8 737 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 CATSPERZQ9NTU4 200 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 LIMD1Q9UGP4 676 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 SLC27A6Q9Y2P4 619 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 TCRBV9S1A1TA0A576 114 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 DNAJA2O60884 412 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 INSRRP14616 1297 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 STAT5AP42229 794 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 CDH8P55286 799 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 MYL6P60660 151 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 VWA5B1Q5TIE3 1220 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 CPA6Q8N4T0 437 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 METTL21AQ8WXB1 218 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 CENPIQ92674 756 aaPredicted RBP9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 TMEM246Q9BRR3 403 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 SPATA9Q9BWV2 254 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 DNAJC11Q9NVH1 559 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 UGT2B11O75310 529 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 ADH1AP07327 375 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 CCL23P55773 120 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 SCN1BQ07699 218 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 ACSM2AQ08AH3 577 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 ACSM2BQ68CK6 577 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 IL27RAQ6UWB1 636 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 GPR135Q8IZ08 494 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 CLIP4Q8N3C7 705 aa9.82□□□□□ -0.84
SPTAN1-228ENST00000635853 METTL6Q8TCB7 284 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms