RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ZNF280BQ86YH2 543 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 THAP11Q96EK4 314 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 IMP4Q96G21 291 aaKnown RBP14□□□□□ -0.17
COL6A1-207ENST00000612273 KCTD14Q9BQ13 255 aaPredicted RBP14□□□□□ -0.17
COL6A1-207ENST00000612273 ACBD6Q9BR61 282 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 ADNPQ9H2P0 1102 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 TMCO1Q9UM00 188 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 ASB1Q9Y576 335 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 FGF10O15520 208 aaPredicted RBP14□□□□□ -0.17
COL6A1-207ENST00000612273 ZNF865P0CJ78 1059 aaPredicted RBP14□□□□□ -0.17
COL6A1-207ENST00000612273 PBX3P40426 434 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 MTPNP58546 118 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 CLCQ05315 142 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 LIPEQ05469 1076 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 PIGFQ07326 219 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 MERTKQ12866 999 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 INPP5AQ14642 412 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 SGO1Q5FBB7 561 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 LDLRAP1Q5SW96 308 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 LDLRAD1Q5T700 205 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 LZTR1Q8N653 840 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 RSPH1Q8WYR4 309 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 GPR21Q99679 349 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 SLC30A3Q99726 388 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 EPB41L1Q9H4G0 881 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 CSNK1G1Q9HCP0 422 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 POLR3BQ9NW08 1133 aaPredicted RBP14□□□□□ -0.17
COL6A1-207ENST00000612273 FADS3Q9Y5Q0 445 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 PLXNA1Q9UIW2 1896 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 A0A0G2JMZ2 1700 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 LRRC37A2A6NM11 1700 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 LDB2O43679 373 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 CACNG3O60359 315 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 MAN1A2O60476 641 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 RAMP2O60895 175 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 MMP2P08253 660 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 HOXD8P13378 290 aaPredicted RBP14□□□□□ -0.17
COL6A1-207ENST00000612273 GSK3BP49841 420 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 TXNL4AP83876 142 aaKnown RBP14□□□□□ -0.17
COL6A1-207ENST00000612273 MS4A13Q5J8X5 152 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 FNDC5Q8NAU1 212 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 OR7D4Q8NG98 312 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 OR4K2Q8NGD2 314 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 SGCDQ92629 289 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 SEPT5Q99719 369 aaPredicted RBP14□□□□□ -0.17
COL6A1-207ENST00000612273 PRM3Q9NNZ6 103 aa14□□□□□ -0.17
COL6A1-207ENST00000612273 MRPL40Q9NQ50 206 aaKnown RBP14□□□□□ -0.17
COL6A1-207ENST00000612273 FXYD1O00168 92 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 NIPSNAP2O75323 286 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 MTHFD2P13995 350 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 LBPP18428 481 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 NFKBIAP25963 317 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 ELK4P28324 431 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 DGKQP52824 942 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 KCNK10P57789 538 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 PURAQ00577 322 aaKnown RBP13.99□□□□□ -0.17
COL6A1-207ENST00000612273 PTPRNQ16849 979 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 PYCR3Q53H96 274 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 FGD3Q5JSP0 725 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 SLC2A7Q6PXP3 512 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 CAMK1DQ8IU85 385 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 TFAP2CQ92754 450 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 ALG2Q9H553 416 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 CXorf21Q9HAI6 301 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 EXD2Q9NVH0 621 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 PCDHGC4Q9Y5F7 938 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 ATE1O95260 518 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 ZNF37AP17032 561 aaPredicted RBP13.99□□□□□ -0.17
COL6A1-207ENST00000612273 DNAJB2P25686 324 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 BNIP3Q12983 259 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 PMS2P3Q13401 168 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 LAPTM5Q13571 262 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 MTG1Q9BT17 334 aaPredicted RBP13.99□□□□□ -0.17
COL6A1-207ENST00000612273 TBCDQ9BTW9 1192 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 ZYG11BQ9C0D3 744 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 DNAAF2Q9NVR5 837 aaKnown RBP13.99□□□□□ -0.17
COL6A1-207ENST00000612273 ZMYM5Q9UJ78 669 aa13.99□□□□□ -0.17
COL6A1-207ENST00000612273 J3QRK9 145 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 KCNH1O95259 989 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 PARNO95453 639 aaKnown RBP13.98□□□□□ -0.17
COL6A1-207ENST00000612273 GUCA1CO95843 209 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 PEX11BO96011 259 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 CD247P20963 164 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 BRMS1LQ5PSV4 323 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 ANKRD34AQ69YU3 496 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 TBPL2Q6SJ96 375 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 KIAA0408Q6ZU52 694 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 SIDT2Q8NBJ9 832 aaKnown RBP13.98□□□□□ -0.17
COL6A1-207ENST00000612273 GIPC2Q8TF65 315 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 FBXL8Q96CD0 374 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 ISOC1Q96CN7 298 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 SMOC2Q9H3U7 446 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 CD274Q9NZQ7 290 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 EIF2B4Q9UI10 523 aaKnown RBP13.98□□□□□ -0.17
COL6A1-207ENST00000612273 TRPV2Q9Y5S1 764 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 A8MX80 341 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 NDUFS3O75489 264 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 OR4F21O95013 312 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 KCNQ1P51787 676 aa13.98□□□□□ -0.17
COL6A1-207ENST00000612273 CLCN2P51788 898 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms