RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 SULT2A1Q06520 285 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 BYSLQ13895 437 aaKnown RBP10.5□□□□□ -0.73
SMG9-207ENST00000598860 SLC45A4Q5BKX6 768 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 GRAMD4Q6IC98 578 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 Q6ZS52 159 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 ASCL5Q7RTU5 278 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 SPPL2CQ8IUH8 684 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 CNTD1Q8N815 330 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 PRELID2Q8N945 189 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 SPATA4Q8NEY3 305 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 CCDC26Q8TAB7 109 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 ABHD4Q8TB40 342 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 NSMCE1Q8WV22 266 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 TFB1MQ8WVM0 346 aaKnown RBP10.5□□□□□ -0.73
SMG9-207ENST00000598860 FAM168AQ92567 244 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 ARHGEF2Q92974 986 aaKnown RBP10.5□□□□□ -0.73
SMG9-207ENST00000598860 MAGOHBQ96A72 148 aaKnown RBP10.5□□□□□ -0.73
SMG9-207ENST00000598860 TSGA13Q96PP4 275 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 QKIQ96PU8 341 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMG9-207ENST00000598860 SMAD5Q99717 465 aaKnown RBP10.5□□□□□ -0.73
SMG9-207ENST00000598860 SLC39A8Q9C0K1 460 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 SP110Q9HB58 689 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 PLK2Q9NYY3 685 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMG9-207ENST00000598860 DEC1Q9P2X7 70 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 GGA2Q9UJY4 613 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 DRG1Q9Y295 367 aaKnown RBP10.5□□□□□ -0.73
SMG9-207ENST00000598860 PCDHGA2Q9Y5H1 932 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 X6R8D5 127 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 FANCMQ8IYD8 2048 aa10.5□□□□□ -0.73
SMG9-207ENST00000598860 BCLAF3A2AJT9 711 aaKnown RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 PRR23AA6NEV1 266 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 C22orf46C9J442 243 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 H7C0C1 242 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 DFFAO00273 331 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 TULP3O75386 442 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 LMNAP02545 664 aaKnown RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 FUCA1P04066 466 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 STIP1P31948 543 aaKnown RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 OPRD1P41143 372 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 CSKP41240 450 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 ATP5OP48047 213 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 PAPOLAP51003 745 aaKnown RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 EPHB1P54762 984 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 TUBB4BP68371 445 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 CHRNEQ04844 493 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 IL10RBQ08334 325 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 LMAN2Q12907 356 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 SLC10A2Q12908 348 aaPredicted RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 EIF4HQ15056 248 aaKnown RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 PRKD1Q15139 912 aaPredicted RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 KCNMB1Q16558 191 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 NAIF1Q69YI7 327 aaPredicted RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 IL31Q6EBC2 164 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 RETSATQ6NUM9 610 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 NPNTQ6UXI9 565 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 ZC3H18Q86VM9 953 aaKnown RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 ZSWIM9Q86XI8 627 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 ZNF354CQ86Y25 554 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 CCDC13Q8IYE1 715 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 BBS5Q8N3I7 341 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 ZBTB44Q8NCP5 570 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 CASKIN2Q8WXE0 1202 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 NELL1Q92832 810 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 SLCO2A1Q92959 643 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 HMCESQ96FZ2 354 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 CELF6Q96J87 481 aaKnown RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 ZNF599Q96NL3 588 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 VAT1Q99536 393 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 AP1M1Q9BXS5 423 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 ACE2Q9BYF1 805 aaPredicted RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 SMURF1Q9HCE7 757 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 DNAJC17Q9NVM6 304 aaKnown RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 SMARCAL1Q9NZC9 954 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 IPO11Q9UI26 975 aaKnown RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 VPS28Q9UK41 221 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 TRHDEQ9UKU6 1024 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 R3HDM2Q9Y2K5 976 aaKnown RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 MFHAS1Q9Y4C4 1052 aa10.49□□□□□ -0.73
SMG9-207ENST00000598860 EP300Q09472 2414 aaPredicted RBP10.49□□□□□ -0.73
SMG9-207ENST00000598860 KDELR3O43731 214 aa10.48□□□□□ -0.73
SMG9-207ENST00000598860 PRAMEF11O60813 436 aa10.48□□□□□ -0.73
SMG9-207ENST00000598860 PRKD3O94806 890 aa10.48□□□□□ -0.73
SMG9-207ENST00000598860 PAPSS2O95340 614 aaPredicted RBP10.48□□□□□ -0.73
SMG9-207ENST00000598860 GAS8O95995 478 aa10.48□□□□□ -0.73
SMG9-207ENST00000598860 APODP05090 189 aa10.48□□□□□ -0.73
SMG9-207ENST00000598860 TDGF1P13385 188 aa10.48□□□□□ -0.73
SMG9-207ENST00000598860 KRT15P19012 456 aa10.48□□□□□ -0.73
SMG9-207ENST00000598860 HLA-FP30511 346 aa10.48□□□□□ -0.73
SMG9-207ENST00000598860 HOXA6P31267 233 aa10.48□□□□□ -0.73
SMG9-207ENST00000598860 ACTN2P35609 894 aa10.48□□□□□ -0.73
SMG9-207ENST00000598860 COILP38432 576 aaPredicted RBP10.48□□□□□ -0.73
SMG9-207ENST00000598860 SLC6A11P48066 632 aa10.48□□□□□ -0.73
SMG9-207ENST00000598860 CORO7P57737 925 aa10.48□□□□□ -0.73
SMG9-207ENST00000598860 SLC20A2Q08357 652 aa10.48□□□□□ -0.73
SMG9-207ENST00000598860 DHX34Q14147 1143 aaKnown RBP10.48□□□□□ -0.73
SMG9-207ENST00000598860 RFTN1Q14699 578 aaPredicted RBP10.48□□□□□ -0.73
SMG9-207ENST00000598860 OASLQ15646 514 aaKnown RBP10.48□□□□□ -0.73
SMG9-207ENST00000598860 GPR19Q15760 415 aa10.48□□□□□ -0.73
SMG9-207ENST00000598860 HSF5Q4G112 596 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms