RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ELMOD1Q8N336 334 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 RYBPQ8N488 228 aaPredicted RBP19.61■□□□□ 0.73
CLIP3-206ENST00000593074 EFHBQ8N7U6 833 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 CLP1Q92989 425 aaKnown RBP19.61■□□□□ 0.73
CLIP3-206ENST00000593074 CCDC124Q96CT7 223 aaKnown RBP19.61■□□□□ 0.73
CLIP3-206ENST00000593074 RCN3Q96D15 328 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 ASB2Q96Q27 587 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 TMEM106CQ9BVX2 250 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 UBXN8O00124 270 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 CKMP06732 381 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 C8AP07357 584 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 CD9P21926 228 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 MC4RP32245 332 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 CDKN1CP49918 316 aaPredicted RBP19.61■□□□□ 0.73
CLIP3-206ENST00000593074 CYHR1Q6ZMK1 362 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 ADGRG6Q86SQ4 1221 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 KREMEN2Q8NCW0 462 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 EXT2Q93063 718 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 FAM136AQ96C01 138 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 LRRC3Q9BY71 257 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 S100A14Q9HCY8 104 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 PPM1HQ9ULR3 514 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 FAM50BQ9Y247 325 aa19.61■□□□□ 0.73
CLIP3-206ENST00000593074 FCF1Q9Y324 198 aaKnown RBP19.61■□□□□ 0.73
CLIP3-206ENST00000593074 CCDC189A1A4V9 331 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 STX7O15400 261 aaKnown RBP19.6■□□□□ 0.73
CLIP3-206ENST00000593074 ERFP50548 548 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 ATP6V0D1P61421 351 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 AP1S1P61966 158 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 SLC7A9P82251 487 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 RAB44Q7Z6P3 723 aaPredicted RBP19.6■□□□□ 0.73
CLIP3-206ENST00000593074 TMC8Q8IU68 726 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 NDE1Q9NXR1 346 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 ZNF510Q9Y2H8 683 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 PFDN6O15212 129 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 CLCN4P51793 760 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 RAD51Q06609 339 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 PPIGQ13427 754 aaKnown RBP eCLIP19.6■□□□□ 0.73
CLIP3-206ENST00000593074 PTPRNQ16849 979 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 TCHHL1Q5QJ38 904 aaPredicted RBP19.6■□□□□ 0.73
CLIP3-206ENST00000593074 HTR3DQ70Z44 454 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 PGAM4Q8N0Y7 254 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 PPFIBP2Q8ND30 876 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 STAG3L4Q8TBR4 150 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 GPR21Q99679 349 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 CFAP97Q9P2B7 532 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 SH3BP1Q9Y3L3 701 aa19.6■□□□□ 0.73
CLIP3-206ENST00000593074 PYGLP06737 847 aa19.59■□□□□ 0.73
CLIP3-206ENST00000593074 PKMP14618 531 aaKnown RBP19.59■□□□□ 0.73
CLIP3-206ENST00000593074 ADARP55265 1226 aaKnown RBP19.59■□□□□ 0.73
CLIP3-206ENST00000593074 SQLEQ14534 574 aa19.59■□□□□ 0.73
CLIP3-206ENST00000593074 UGT3A2Q3SY77 523 aa19.59■□□□□ 0.73
CLIP3-206ENST00000593074 AARS2Q5JTZ9 985 aaKnown RBP19.59■□□□□ 0.73
CLIP3-206ENST00000593074 ATXN7L2Q5T6C5 722 aaPredicted RBP19.59■□□□□ 0.73
CLIP3-206ENST00000593074 CLEC6AQ6EIG7 209 aa19.59■□□□□ 0.73
CLIP3-206ENST00000593074 MFN1Q8IWA4 741 aa19.59■□□□□ 0.73
CLIP3-206ENST00000593074 DDI1Q8WTU0 396 aa19.59■□□□□ 0.73
CLIP3-206ENST00000593074 GCNAQ96QF7 691 aa19.59■□□□□ 0.73
CLIP3-206ENST00000593074 SERPINI1Q99574 410 aa19.59■□□□□ 0.73
CLIP3-206ENST00000593074 EMILIN2Q9BXX0 1053 aa19.59■□□□□ 0.73
CLIP3-206ENST00000593074 IL17CQ9P0M4 197 aa19.59■□□□□ 0.73
CLIP3-206ENST00000593074 PCDHB9Q9Y5E1 797 aa19.59■□□□□ 0.73
CLIP3-206ENST00000593074 DENND4CQ5VZ89 1909 aa19.59■□□□□ 0.73
CLIP3-206ENST00000593074 TRAV19A0A0A6YYK7 116 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 UBDO15205 165 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 SIX3O95343 332 aaPredicted RBP19.58■□□□□ 0.73
CLIP3-206ENST00000593074 MT-CO1P00395 513 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 FGF4P08620 206 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 SH3BP2P78314 561 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 PTK2BQ14289 1009 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 PTPRRQ15256 657 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 PPP1R3AQ16821 1122 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 PFKFB4Q16877 469 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 CTSL3PQ5NE16 218 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 BNC2Q6ZN30 1099 aaPredicted RBP19.58■□□□□ 0.73
CLIP3-206ENST00000593074 NKAPQ8N5F7 415 aaKnown RBP19.58■□□□□ 0.73
CLIP3-206ENST00000593074 HMGCLL1Q8TB92 370 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 USP13Q92995 863 aaPredicted RBP19.58■□□□□ 0.73
CLIP3-206ENST00000593074 BHMTQ93088 406 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 MYO19Q96H55 970 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 TTC1Q99614 292 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 TCF25Q9BQ70 676 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 C2orf49Q9BVC5 232 aaPredicted RBP19.58■□□□□ 0.73
CLIP3-206ENST00000593074 EFCAB1Q9HAE3 211 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 MAGEE1Q9HCI5 957 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 BPIFA1Q9NP55 256 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 IKZF3Q9UKT9 509 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 ZNF711Q9Y462 761 aa19.58■□□□□ 0.73
CLIP3-206ENST00000593074 A0A1W2PRU2 124 aa19.58■□□□□ 0.72
CLIP3-206ENST00000593074 MAP3K7O43318 606 aa19.58■□□□□ 0.72
CLIP3-206ENST00000593074 VPS26AO75436 327 aa19.58■□□□□ 0.72
CLIP3-206ENST00000593074 CDK14O94921 469 aa19.58■□□□□ 0.72
CLIP3-206ENST00000593074 TSPAN8P19075 237 aa19.58■□□□□ 0.72
CLIP3-206ENST00000593074 XIAPP98170 497 aa19.58■□□□□ 0.72
CLIP3-206ENST00000593074 PIGGQ5H8A4 983 aa19.58■□□□□ 0.72
CLIP3-206ENST00000593074 CLYBLQ8N0X4 340 aa19.58■□□□□ 0.72
CLIP3-206ENST00000593074 CPXM2Q8N436 756 aa19.58■□□□□ 0.72
CLIP3-206ENST00000593074 EFCAB3Q8N7B9 438 aa19.58■□□□□ 0.72
CLIP3-206ENST00000593074 PYDC1Q8WXC3 89 aa19.58■□□□□ 0.72
CLIP3-206ENST00000593074 C19orf60Q96EN9 201 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms