RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 TBC1D3IA0A087WXS9 549 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 TBC1D3EA0A087X179 549 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 TBC1D3KA0A087X1G2 549 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 TBC1D3FA6NER0 549 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-219ENST00000592927 TRABD2BA6NFA1 517 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 TBC1D3LB9A6J9 549 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 AGPSO00116 658 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 AP1G1O43747 822 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 FZD6O60353 706 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 AVILO75366 819 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 PCDH8O95206 1070 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 ACSL3O95573 720 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 EPOP01588 193 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 PDHA1P08559 390 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 TBC1D3HP0C7X1 549 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 ITPKBP27987 946 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 ADRA1AP35348 466 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 ABL2P42684 1182 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 WNT3AP56704 352 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 TAS2R38P59533 333 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 RPL26P61254 145 aaKnown RBP11.89□□□□□ -0.51
DDX39A-219ENST00000592927 CDK18Q07002 472 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 SRSF1Q07955 248 aaKnown RBP eCLIP11.89□□□□□ -0.512e-6■■□□□ 13.7
DDX39A-219ENST00000592927 ELP6Q0PNE2 266 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 FASTKD3Q14CZ7 662 aaKnown RBP11.89□□□□□ -0.51
DDX39A-219ENST00000592927 LRRC73Q5JTD7 316 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 TBC1D3GQ6DHY5 549 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 TBC1D3CQ6IPX1 549 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 KDELC1Q6UW63 502 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 CYS1Q717R9 158 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 KDELC2Q7Z4H8 507 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 ZSWIM9Q86XI8 627 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 MARCH9Q86YJ5 346 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 ANKMY2Q8IV38 441 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 TBC1D3Q8IZP1 549 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-219ENST00000592927 CNPY4Q8N129 248 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 LPCAT1Q8NF37 534 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 IPMKQ8NFU5 416 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 OR52K1Q8NGK4 314 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 OR2T34Q8NGX1 318 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 FEM1CQ96JP0 617 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 MRGPRX2Q96LB1 330 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 VPS37BQ9H9H4 285 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 PREBQ9HCU5 417 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 PCDH12Q9NPG4 1184 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 FETUBQ9UGM5 382 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 ZC3H7BQ9UGR2 993 aaKnown RBP11.89□□□□□ -0.51
DDX39A-219ENST00000592927 PILRBQ9UKJ0 227 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 RPL26L1Q9UNX3 145 aaKnown RBP11.89□□□□□ -0.51
DDX39A-219ENST00000592927 CHMP2BQ9UQN3 213 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 APOBEC2Q9Y235 224 aaKnown RBP11.89□□□□□ -0.51
DDX39A-219ENST00000592927 FADS3Q9Y5Q0 445 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 APC2O95996 2303 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 LOC285095A0A1B0GVY8 99 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 GOLGA8KD6RF30 607 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 AREL1O15033 823 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 TSPAN6O43657 245 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 NDST3O95803 873 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 PRKCGP05129 697 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 MYZAPP0CAP1 466 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 PGAM1P18669 254 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 HLA-DPA1P20036 260 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 ITPKAP23677 461 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 STX2P32856 288 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 GRIA1P42261 906 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 ZNF844Q08AG5 666 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 FRG1Q14331 258 aaKnown RBP11.88□□□□□ -0.51
DDX39A-219ENST00000592927 SPARCL1Q14515 664 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 DUOXA1Q1HG43 343 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 KLHL38Q2WGJ6 581 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 CEP85LQ5SZL2 805 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 STEAP4Q687X5 459 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 NEK5Q6P3R8 708 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 RANBP10Q6VN20 620 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 C3orf62Q6ZUJ4 267 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 USP45Q70EL2 814 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 RIBC1Q8N443 379 aaPredicted RBP11.88□□□□□ -0.51
DDX39A-219ENST00000592927 DEFB119Q8N690 84 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 CADM4Q8NFZ8 388 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 PTCD2Q8WV60 388 aaKnown RBP11.88□□□□□ -0.51
DDX39A-219ENST00000592927 PIH1D2Q8WWB5 315 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 STAMBPL1Q96FJ0 436 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 FICDQ9BVA6 458 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 PCED1AQ9H1Q7 454 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 C6orf106Q9H6K1 298 aaPredicted RBP11.88□□□□□ -0.51
DDX39A-219ENST00000592927 SAMD15Q9P1V8 674 aa11.88□□□□□ -0.51
DDX39A-219ENST00000592927 MYO18BQ8IUG5 2567 aa11.87□□□□□ -0.51
DDX39A-219ENST00000592927 URB1O60287 2271 aaKnown RBP11.87□□□□□ -0.51
DDX39A-219ENST00000592927 ANKRD66B4E2M5 251 aa11.87□□□□□ -0.51
DDX39A-219ENST00000592927 RNGTTO60942 597 aaKnown RBP11.87□□□□□ -0.51
DDX39A-219ENST00000592927 USP12O75317 370 aa11.87□□□□□ -0.51
DDX39A-219ENST00000592927 BANF1O75531 89 aa11.87□□□□□ -0.51
DDX39A-219ENST00000592927 FSBPO95073 299 aa11.87□□□□□ -0.51
DDX39A-219ENST00000592927 SYF2O95926 243 aaKnown RBP11.87□□□□□ -0.51
DDX39A-219ENST00000592927 AGTP01019 485 aa11.87□□□□□ -0.51
DDX39A-219ENST00000592927 PRLP01236 227 aa11.87□□□□□ -0.51
DDX39A-219ENST00000592927 POLBP06746 335 aa11.87□□□□□ -0.51
DDX39A-219ENST00000592927 CYP2A6P11509 494 aaPredicted RBP11.87□□□□□ -0.51
DDX39A-219ENST00000592927 CTPS1P17812 591 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms