RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 RFX2P48378 723 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 PPP3CCP48454 512 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 AARSP49588 968 aaKnown RBP eCLIP3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 RASSF2P50749 326 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 TAF11Q15544 211 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 DUSP6Q16828 381 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 AP5B1Q2VPB7 878 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 SH2D4BQ5SQS7 431 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 CFAP58Q5T655 872 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 MFSD4BQ5TF39 518 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 CCDC129Q6ZRS4 1044 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 Q6ZTK2 550 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 ERO1BQ86YB8 467 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 TDHQ8IZJ6 230 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 DPP10Q8N608 796 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 ANKRD13CQ8N6S4 541 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 GABPB2Q8TAK5 448 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 CREB3L4Q8TEY5 395 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 FAR1Q8WVX9 515 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 SDCCAG3Q96C92 435 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 MARK4Q96L34 752 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 FRG2BQ96QU4 278 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 CDX2Q99626 313 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 CTDSP1Q9GZU7 261 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 CCDC68Q9H2F9 335 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 PNNQ9H307 717 aaKnown RBP3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 PLAC1Q9HBJ0 212 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 ZCCHC17Q9NP64 241 aaKnown RBP3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 KRT84Q9NSB2 600 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 HAUS2Q9NVX0 235 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 CDH22Q9UJ99 828 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 OSGIN2Q9Y236 505 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 RAP2CQ9Y3L5 183 aa3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 MYO5AQ9Y4I1 1855 aaKnown RBP3.51□□□□□ -1.85
HMGB1P6-201ENST00000569046 ZNFX1Q9P2E3 1918 aaKnown RBP3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 IGKV2D-30A0A075B6S6 120 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 A0A1B0GVT2 93 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 INAFM1C9JVW0 142 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 STMND1H3BQB6 276 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 SPTLC2O15270 562 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 SEPT4O43236 478 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 RGS14O43566 566 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 CCNT1O60563 726 aaKnown RBP3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 PTP4A3O75365 173 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 FRAT2O75474 233 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 TMCC1O94876 653 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 LCATP04180 440 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 PLA2G2AP14555 144 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 ARSBP15848 533 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 CYP2B6P20813 491 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 CD72P21854 359 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 ABCD3P28288 659 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 CCKARP32238 428 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 PTPN9P43378 593 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 MTNR1AP48039 350 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 MCM2P49736 904 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 PGGT1BP53609 377 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 PMS2P54278 862 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 PRMT2P55345 433 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 ARHGAP8P85298 464 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 NEXNQ0ZGT2 675 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 PPIL2Q13356 520 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 TNFAIP1Q13829 316 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 BYSLQ13895 437 aaKnown RBP3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 GCKRQ14397 625 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 LRRC26Q2I0M4 334 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 RUNDC3AQ59EK9 446 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 SNX30Q5VWJ9 437 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 ATG16L1Q676U5 607 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 Q6ZSV7 163 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 MEPCEQ7L2J0 689 aaKnown RBP3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 WDR5BQ86VZ2 330 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 FAM185AQ8N0U4 392 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 HORMAD2Q8N7B1 307 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 TBC1D22AQ8WUA7 517 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 HDAC7Q8WUI4 952 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 MIB2Q96AX9 1013 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 ZNF479Q96JC4 524 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 FAM84BQ96KN1 310 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 LYZL4Q96KX0 146 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 TIGD1Q96MW7 591 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 REEP2Q9BRK0 252 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 KLHL31Q9H511 634 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 C11orf49Q9H6J7 331 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 KRCC1Q9NPI7 259 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 BABAM1Q9NWV8 329 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 NLKQ9UBE8 527 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 VPS28Q9UK41 221 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 DNAJC16Q9Y2G8 782 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 DERAQ9Y315 318 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 SLC4A4Q9Y6R1 1079 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 ZHX2Q9Y6X8 837 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 RANBP2P49792 3224 aaKnown RBP3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 RLFQ13129 1914 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 A0A0C4DFX4 3053 aa3.5□□□□□ -1.85
HMGB1P6-201ENST00000569046 PFASO15067 1338 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 FAM205AQ6ZU69 1335 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 CACNA1FO60840 1977 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 LOC285556D6RIA3 1793 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 CCDC196A0A1B0GTZ2 297 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms